SCOPe 2.08: Domain d4tpha_: 4tph A:

Lineage for d4tpha_ (4tph A:)

1. Root: SCOPe 2.08

2. Class f: Membrane and cell surface proteins and peptides [56835] (69 folds)

3. Fold f.38: MFS general substrate transporter [103472] (1 superfamily)
   12 transmembrane helices; duplication: the N- and C-terminal halves are structurally similar

4. Superfamily f.38.1: MFS general substrate transporter [103473] (5 families)

5. Family f.38.1.0: automated matches [354001] (1 protein)
   not a true family

6. Protein automated matches [354002] (3 species)
   not a true protein

7. Species Shewanella oneidensis [TaxId:211586] [419932] (1 PDB entry)

8. Domain d4tpha_: 4tph A: [414320]
   automated match to d6gs4a_
   complexed with ala, dby, lmt, zn

Details for d4tpha_

PDB Entry: 4tph, 3.16 Å

PDB Description: selectivity mechanism of a bacterial homologue of the human drug peptide transporters pept1 and pept2

PDB Compounds: (A:) Proton:oligopeptide symporter POT family

SCOPe Domain Sequences for d4tpha_:

Sequence, based on SEQRES records:

>d4tpha_ f.38.1.0 (A:) automated matches {Shewanella oneidensis [TaxId: 211586]}
vskthsfmtvslielwerfgyygmqalivyfmvqrlgfddsranlvwsacaaliyvspai
ggwvgdkilgtkrtmllgagilsvgyalmtvptentwfmfsalgvivvgnglfkpnagnl
vrkiyegddskidsaftiyymavnvgstfsmlltpwikdyvnaqygnefgwhaafavccv
gilvglgnyalmhkslanygsepdtrpvnkkslaivlalaalsvvasaiileyedvarvf
vyaagvavlgiffhlirtsepseragliaaliltvqtvfffifyqqmstslalfalrnvd
wdfqvfgthlwtwspaqfqalnpiwimvlspvlawsyswagrnnkdfsiaakfalgfavv
aigffiygfagqfavngktsswvmiwgyasyslgellvsglglamiaryvparmggfmmg
ayfvasgisqylggvvanfasvpqdlvdplqtlpvytnlfnklgvaavvctiialavlpl
mrrlt

Sequence, based on observed residues (ATOM records):

>d4tpha_ f.38.1.0 (A:) automated matches {Shewanella oneidensis [TaxId: 211586]}
vskthsfmtvslielwerfgyygmqalivyfmvqrlgfddsranlvwsacaaliyvspai
ggwvgdkilgtkrtmllgagilsvgyalmtvptentwfmfsalgvivvgnglfkpnagnl
vrkiyeskidsaftiyymavnvgstfsmlltpwikdyvnaqygnefgwhaafavccvgil
vglgnyalmhkslanygsepdtrpvnkkslaivlalaalsvvasaiileyedvarvfvya
agvavlgiffhleragliaaliltvqtvfffifyqqmstslalfalrnvdwdfqvfgthl
wtwspaqfqalnpiwimvlspvlawiaakfalgfavvaigffiygfagqfavngktsswv
miwgyasyslgellvsglglamiarmmgayfvasgisqylggvvanfasvpqdlvdplqt
lpvytnlfnklgvaavvctiialavlplmrrlt

Timeline for d4tpha_:

• d4tpha_ is new in SCOPe 2.08-stable