Lineage for d3zkdh2 (3zkd H:245-421)

  1. Root: SCOPe 2.08
  2. 2923792Class d: Alpha and beta proteins (a+b) [53931] (396 folds)
  3. 2930059Fold d.14: Ribosomal protein S5 domain 2-like [54210] (1 superfamily)
    core: beta(3)-alpha-beta-alpha; 2 layers: alpha/beta; left-handed crossover
  4. 2930060Superfamily d.14.1: Ribosomal protein S5 domain 2-like [54211] (13 families) (S)
  5. 2930912Family d.14.1.0: automated matches [191504] (1 protein)
    not a true family
  6. 2930913Protein automated matches [190826] (23 species)
    not a true protein
  7. 2931088Species Mycobacterium tuberculosis [TaxId:1773] [224917] (3 PDB entries)
  8. 2931114Domain d3zkdh2: 3zkd H:245-421 [413632]
    Other proteins in same PDB: d3zkda1, d3zkdb1, d3zkdc1, d3zkdd1, d3zkde1, d3zkdf1, d3zkdg1, d3zkdh1
    automated match to d6zt3a2
    complexed with anp, mg

Details for d3zkdh2

PDB Entry: 3zkd (more details), 2.95 Å

PDB Description: crystal structure of the atpase region of mycobacterium tuberculosis gyrb with amppnp
PDB Compounds: (H:) DNA gyrase subunit b

SCOPe Domain Sequences for d3zkdh2:

Sequence, based on SEQRES records: (download)

>d3zkdh2 d.14.1.0 (H:245-421) automated matches {Mycobacterium tuberculosis [TaxId: 1773]}
kvksrtfhypgglvdfvkhinrtknaihssivdfsgkgtgheveiamqwnagysesvhtf
antintheggtheegfrsaltsvvnkyakdrkllkdkdpnltgddireglaavisvkvse
pqfegqtktklgntevksfvqkvcneqlthwfeanptdakvvvnkavssaqariaar

Sequence, based on observed residues (ATOM records): (download)

>d3zkdh2 d.14.1.0 (H:245-421) automated matches {Mycobacterium tuberculosis [TaxId: 1773]}
kvksrtfhypgglvdfvkhinrtknaihssivdfsgkgtgheveiamqwnagysesvhtf
antintheggtheegfrsaltsvvnkyakdrklldpnltgddireglaavisvkvsepqf
egqtktklgntevksfvqkvcneqlthwfeanptdakvvvnkavssaqariaar

SCOPe Domain Coordinates for d3zkdh2:

Click to download the PDB-style file with coordinates for d3zkdh2.
(The format of our PDB-style files is described here.)

Timeline for d3zkdh2:

  • d3zkdh2 is new in SCOPe 2.08-stable