SCOPe 2.08: Domain d3zkda2: 3zkd A:244-424

Lineage for d3zkda2 (3zkd A:244-424)

1. Root: SCOPe 2.08

2. Class d: Alpha and beta proteins (a+b) [53931] (396 folds)

3. Fold d.14: Ribosomal protein S5 domain 2-like [54210] (1 superfamily)
   core: beta(3)-alpha-beta-alpha; 2 layers: alpha/beta; left-handed crossover

4. Superfamily d.14.1: Ribosomal protein S5 domain 2-like [54211] (13 families)

5. Family d.14.1.0: automated matches [191504] (1 protein)
   not a true family

6. Protein automated matches [190826] (23 species)
   not a true protein

7. Species Mycobacterium tuberculosis [TaxId:1773] [224917] (3 PDB entries)

8. Domain d3zkda2: 3zkd A:244-424 [413618]
   Other proteins in same PDB: d3zkda1, d3zkdb1, d3zkdc1, d3zkdd1, d3zkde1, d3zkdf1, d3zkdg1, d3zkdh1
   automated match to d6zt3a2
   complexed with anp, mg

Details for d3zkda2

PDB Entry: 3zkd, 2.95 Å

PDB Description: crystal structure of the atpase region of mycobacterium tuberculosis gyrb with amppnp

PDB Compounds: (A:) DNA gyrase subunit b

SCOPe Domain Sequences for d3zkda2:

Sequence, based on SEQRES records:

>d3zkda2 d.14.1.0 (A:244-424) automated matches {Mycobacterium tuberculosis [TaxId: 1773]}
hkvksrtfhypgglvdfvkhinrtknaihssivdfsgkgtgheveiamqwnagysesvht
fantintheggtheegfrsaltsvvnkyakdrkllkdkdpnltgddireglaavisvkvs
epqfegqtktklgntevksfvqkvcneqlthwfeanptdakvvvnkavssaqariaarka
r

Sequence, based on observed residues (ATOM records):

>d3zkda2 d.14.1.0 (A:244-424) automated matches {Mycobacterium tuberculosis [TaxId: 1773]}
hkvksrtfhypgglvdfvkhinrtknaihssivdfsgkgtgheveiamqwnagysesvht
fantintheggtheegfrsaltsvvnkyakdrkdpnltgddireglaavisvkvsepqfe
gqtktklgntevksfvqkvcneqlthwfeanptdakvvvnkavssaqariaarkar

Timeline for d3zkda2:

• d3zkda2 is new in SCOPe 2.08-stable