SCOPe 2.08: Domain d3vyob2: 3vyo B:252-408

Lineage for d3vyob2 (3vyo B:252-408)

1. Root: SCOPe 2.08

2. Class b: All beta proteins [48724] (180 folds)

3. Fold b.160: L,D-transpeptidase catalytic domain-like [141522] (1 superfamily)
   barrel, closed; n=8, S=10; one overside connection

4. Superfamily b.160.1: L,D-transpeptidase catalytic domain-like [141523] (1 family)
   automatically mapped to Pfam PF03734

5. Family b.160.1.1: L,D-transpeptidase catalytic domain-like [141524] (3 proteins)
   Pfam PF03734; ErfK/YbiS/YcfS/YnhG

6. Protein automated matches [234004] (6 species)
   not a true protein

7. Species Mycobacterium tuberculosis [TaxId:1773] [419883] (5 PDB entries)

8. Domain d3vyob2: 3vyo B:252-408 [413507]
   Other proteins in same PDB: d3vyoa1, d3vyob1
   automated match to d3tura2
   mutant

Details for d3vyob2

PDB Entry: 3vyo, 1.8 Å

PDB Description: Crystal structure of Mycobacterium tuberculosis L,D-transpeptidase LdtMt2 N140 truncation mutant (resideus 140-408)

PDB Compounds: (B:) probable conserved lipoprotein lpps

SCOPe Domain Sequences for d3vyob2:

Sequence; same for both SEQRES and ATOM records:

>d3vyob2 b.160.1.1 (B:252-408) automated matches {Mycobacterium tuberculosis [TaxId: 1773]}
eviataddntkiltvrvngevvksmptsmgkdstptangiyivgsrykhiimdsstygvp
vnspngyrtdvdwatqisysgvfvhsapwsvgaqghtntshgclnvspsnaqwfydhvkr
gdivevvntvggtlpgidglgdwnipwdqwragnaka

Timeline for d3vyob2:

• d3vyob2 is new in SCOPe 2.08-stable