Class h: Coiled coil proteins [57942] (7 folds) |
Fold h.3: Stalk segment of viral fusion proteins [58063] (3 superfamilies) core: trimeric coiled coil |
Superfamily h.3.3: Coronavirus S2 glycoprotein [111474] (2 families) |
Family h.3.3.2: Coronavirus spike glycoprotein S2 subunit [418800] (1 protein) includes beta sheet and helical linker in addition to coiled coil Pfam PF01601 |
Protein Coronavirus spike glycoprotein S1 [419103] (1 species) |
Species Murine hepatitis virus (strain a59) [TaxID:11142] [419614] (1 PDB entry) |
Domain d3jcla4: 3jcl A:717-1118 [413259] Other proteins in same PDB: d3jcla1, d3jcla2, d3jcla3 |
PDB Entry: 3jcl (more details), 4 Å
SCOPe Domain Sequences for d3jcla4:
Sequence, based on SEQRES records: (download)
>d3jcla4 h.3.3.2 (A:717-1118) Coronavirus spike glycoprotein S1 {Murine hepatitis virus (strain a59) [TaxID:11142]} ssvstgyrlttfepytpmlvndsvqsvdglyemqiptnftighheefiqtrspkvtidca afvcgdntacrqqlveygsfcvnvnailnevnnlldnmqlqvasalmqgvtissrlpdgi sgpiddinfspllgcigstcaedgngpsairgrsaiedllfdkvklsdvgfveaynnctg gqevrdllcvqsfngikvlppvlsesqisgyttgataaamfppwsaaagvpfslsvqyri nglgvtmnvlsenqkmiasafnnalgaiqdgfdatnsalgkiqsvvnanaealnnllnql snrfgaisaslqeiltrleaveakaqidrlingrltalnayiskqlsdstlikvsaaqai ekvnecvksqttrinfcgngnhilslvqnapyglyfihfsyv
>d3jcla4 h.3.3.2 (A:717-1118) Coronavirus spike glycoprotein S1 {Murine hepatitis virus (strain a59) [TaxID:11142]} ssvstgyrlttfepytpmlvndsvqsvdglyemqiptnftighheefiqtrspkvtidca afvcgdntacrqqlveygsfcvnvnailnevnnlldnmqlqvasalmqgvsairgrsaie dllfdkvklsdvgfveaynnctggqevrdllcvqsfngikvlppvlsesqisgyttgata aamfppwsaaagvpfslsvqyringlgvtmnvlsenqkmiasafnnalgaiqdgfdatns algkiqsvvnanaealnnllnqlsnrfgaisaslqeiltrleaveakaqidrlingrlta lnayiskqlsdstlikvsaaqaiekvnecvksqttrinfcgngnhilslvqnapyglyfi hfsyv
Timeline for d3jcla4: