Lineage for d5vjoc_ (5vjo C:)

  1. Root: SCOPe 2.08
  2. 2739516Class b: All beta proteins [48724] (180 folds)
  3. 2739517Fold b.1: Immunoglobulin-like beta-sandwich [48725] (33 superfamilies)
    sandwich; 7 strands in 2 sheets; greek-key
    some members of the fold have additional strands
  4. 2739518Superfamily b.1.1: Immunoglobulin [48726] (5 families) (S)
  5. 2739519Family b.1.1.1: V set domains (antibody variable domain-like) [48727] (33 proteins)
  6. 2742100Protein automated matches [190119] (24 species)
    not a true protein
  7. 2744177Species Mouse (Mus musculus) [TaxId:10090] [186842] (622 PDB entries)
  8. 2744966Domain d5vjoc_: 5vjo C: [410598]
    Other proteins in same PDB: d5vjob1, d5vjob2, d5vjod1, d5vjod2, d5vjoe_, d5vjof_
    automated match to d6shgh_
    complexed with cl, na; mutant

Details for d5vjoc_

PDB Entry: 5vjo (more details), 2.43 Å

PDB Description: complex between hyhel10 fab fragment heavy chain mutant i29f and pekin duck egg lysozyme isoform i (del-i)
PDB Compounds: (C:) HyHEL10 heavy chain Fab fragment carrying I29F mutation.

SCOPe Domain Sequences for d5vjoc_:

Sequence, based on SEQRES records: (download)

>d5vjoc_ b.1.1.1 (C:) automated matches {Mouse (Mus musculus) [TaxId: 10090]}
dvqlqesgpslvkpsqtlsltcsvtgdsftsdywswirkfpgnrleymgyvsysgstyyn
pslksrisitrdtsknqyyldlnsvttedtatyycanwdgdywgqgtlvtvsaakttpps
vyplapgsaaqtnsmvtlgclvkgyfpepvtvtwnsgslssgvhtfpavlqsdlytlsss
vtvpsstwpsetvtcnvahpasstkvdkkivpr

Sequence, based on observed residues (ATOM records): (download)

>d5vjoc_ b.1.1.1 (C:) automated matches {Mouse (Mus musculus) [TaxId: 10090]}
dvqlqesgpslvkpsqtlsltcsvtgdsftsdywswirkfpgnrleymgyvsysgstyyn
pslksrisitrdtsknqyyldlnsvttedtatyycanwdgdywgqgtlvtvsaakttpps
vyplaptnsmvtlgclvkgyfpepvtvtwnsgslssgvhtfpavlqsdlytlsssvtvps
stwpsetvtcnvahpasstkvdkkivpr

SCOPe Domain Coordinates for d5vjoc_:

Click to download the PDB-style file with coordinates for d5vjoc_.
(The format of our PDB-style files is described here.)

Timeline for d5vjoc_:

  • d5vjoc_ is new in SCOPe 2.08-stable