Lineage for d5ikcb1 (5ikc B:2-215)

  1. Root: SCOPe 2.08
  2. Class b: All beta proteins [48724] (180 folds)
  3. Fold b.1: Immunoglobulin-like beta-sandwich [48725] (33 superfamilies)
    sandwich; 7 strands in 2 sheets; greek-key
    some members of the fold have additional strands
  4. Superfamily b.1.1: Immunoglobulin [48726] (5 families) (S)
  5. Family b.1.1.1: V set domains (antibody variable domain-like) [48727] (33 proteins)
  6. Protein automated matches [190119] (23 species)
    not a true protein
  7. Species Mouse (Mus musculus) [TaxId:10090] [186842] (610 PDB entries)
  8. Domain d5ikcb1: 5ikc B:2-215 [410183]
    Other proteins in same PDB: d5ikca1, d5ikca2, d5ikca3, d5ikcb2, d5ikch2, d5ikcl1, d5ikcl2, d5ikcl3, d5ikcm1, d5ikcm2, d5ikcn1, d5ikcn2
    automated match to d6shgh_
    complexed with cl

Details for d5ikcb1

PDB Entry: 5ikc (more details), 2.06 Å

PDB Description: x-ray structure of the n-terminal domain of human doublecortin in complex with fab
PDB Compounds: (B:) Ighg protein

SCOPe Domain Sequences for d5ikcb1:

Sequence, based on SEQRES records: (download)

>d5ikcb1 b.1.1.1 (B:2-215) automated matches {Mouse (Mus musculus) [TaxId: 10090]}
vqlqqsgadlvrpgasvklsctasgfdikddyvhwvkqrpeqglewigridpangatkya
pkfqdkatltadtssntaylqlssltsedtavyycgrskyfdswgqgttltvssakttpp
svyplapgcgdttgssvtlgclvkgyfpesvtvtwnsgslsssvhtfpallqsglytmss
svtvpsstwpsqtvtcsvahpassttvdkkleps

Sequence, based on observed residues (ATOM records): (download)

>d5ikcb1 b.1.1.1 (B:2-215) automated matches {Mouse (Mus musculus) [TaxId: 10090]}
vqlqqsgadlvrpgasvklsctasgfdikddyvhwvkqrpeqglewigridpangatkya
pkfqdkatltadtssntaylqlssltsedtavyycgrskyfdswgqgttltvssakttpp
svyplapgcgdttgssvtlgclvkgyfpesvtvtwnsssvhtfpallqsglytmsssvtv
psstwpsqtvtcsvahpassttvdkkleps

SCOPe Domain Coordinates for d5ikcb1 are not available.

Timeline for d5ikcb1:

  • d5ikcb1 is new in SCOPe 2.08-stable

View in 3D
Domains from same chain:
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d5ikcb2
View in 3D
Domains from other chains:
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d5ikca1, d5ikca2, d5ikca3, d5ikch1, d5ikch2, d5ikcl1, d5ikcl2, d5ikcl3, d5ikcm1, d5ikcm2, d5ikcn1, d5ikcn2