Lineage for d5f6ib_ (5f6i B:)

  1. Root: SCOPe 2.08
  2. 2739516Class b: All beta proteins [48724] (180 folds)
  3. 2739517Fold b.1: Immunoglobulin-like beta-sandwich [48725] (33 superfamilies)
    sandwich; 7 strands in 2 sheets; greek-key
    some members of the fold have additional strands
  4. 2739518Superfamily b.1.1: Immunoglobulin [48726] (5 families) (S)
  5. 2739519Family b.1.1.1: V set domains (antibody variable domain-like) [48727] (33 proteins)
  6. 2742100Protein automated matches [190119] (24 species)
    not a true protein
  7. 2745451Species Rhesus monkey (Macaca mulatta) [TaxId:9544] [377132] (6 PDB entries)
  8. 2745456Domain d5f6ib_: 5f6i B: [410038]
    Other proteins in same PDB: d5f6ic1, d5f6ic2
    automated match to d6shgh_

Details for d5f6ib_

PDB Entry: 5f6i (more details), 2.32 Å

PDB Description: crystal structure of tier 2 neutralizing antibody dh428 from a rhesus macaque
PDB Compounds: (B:) DH428 Antibody Heavy Chain

SCOPe Domain Sequences for d5f6ib_:

Sequence, based on SEQRES records: (download)

>d5f6ib_ b.1.1.1 (B:) automated matches {Rhesus monkey (Macaca mulatta) [TaxId: 9544]}
vqlvesggglvqpggslrlscaasgftfstygmswvrqapgkglewvsyisisggstyyt
dsvkgrftisrdnskntlslqinslrpedtavyycakegwayfdywgqgvlvtvsgastk
gpsvfplapsskstsgtaalgclvkdyfpepvtvswnsgaltsgvhtfpavlqssglysl
ssvvtvpssslgtqtyicnvnhkpsntkvdkrvepks

Sequence, based on observed residues (ATOM records): (download)

>d5f6ib_ b.1.1.1 (B:) automated matches {Rhesus monkey (Macaca mulatta) [TaxId: 9544]}
vqlvesggglvqpggslrlscaasgftfstygmswvrqapgkglewvsyisisggstyyt
dsvkgrftisrdnskntlslqinslrpedtavyycakegwayfdywgqgvlvtvsgastk
gpsvfplaptaalgclvkdyfpepvtvswnsgaltsgvhtfpavlqssglyslssvvtvp
ssslgtqtyicnvnhkpsntkvdkrvepks

SCOPe Domain Coordinates for d5f6ib_:

Click to download the PDB-style file with coordinates for d5f6ib_.
(The format of our PDB-style files is described here.)

Timeline for d5f6ib_:

  • d5f6ib_ is new in SCOPe 2.08-stable