Lineage for d4x7fb_ (4x7f B:)

  1. Root: SCOPe 2.08
  2. 2739516Class b: All beta proteins [48724] (180 folds)
  3. 2821496Fold b.121: Nucleoplasmin-like/VP (viral coat and capsid proteins) [88632] (7 superfamilies)
    sandwich; 8 strands in 2 sheets; jelly-roll; some members can have additional 1-2 strands
    characteristic interaction between the domains of this fold allows the formation of five-fold and pseudo six-fold assemblies
  4. 2821778Superfamily b.121.4: Positive stranded ssRNA viruses [88633] (10 families) (S)
  5. 2822534Family b.121.4.0: automated matches [191569] (1 protein)
    not a true family
  6. 2822535Protein automated matches [190988] (51 species)
    not a true protein
  7. 2822920Species Norwalk virus [TaxId:11983] [419865] (22 PDB entries)
  8. 2822950Domain d4x7fb_: 4x7f B: [409641]
    Other proteins in same PDB: d4x7fc1, d4x7fc2, d4x7fd1, d4x7fd2
    automated match to d5or7a_
    complexed with edo, imd, na, po4

Details for d4x7fb_

PDB Entry: 4x7f (more details), 1.7 Å

PDB Description: crystal structure of norovirus gii.10 p domain in complex with nano-25
PDB Compounds: (B:) capsid protein

SCOPe Domain Sequences for d4x7fb_:

Sequence, based on SEQRES records: (download)

>d4x7fb_ b.121.4.0 (B:) automated matches {Norwalk virus [TaxId: 11983]}
skpftlpiltlgeltnsrfplpidvlytnpnesaivqcqngrctldgelqgttqllptgi
cafrgkvtqqvqdehrgthwnmtvtnlngtpfdptedvpaplgtpdfsgqiygvisqrnt
ntvpgegnlpanraheaviatyspkftpklgniqfstwetqdvssgqptkftpvglasvd
anshfdqwtlpsysgaltlnmnlapsvapvfpgecllffrsfiplkggygnpaidclmpq
ewvqhlyqesapslsdvalvryvnpetgrtlfeaklhrngfltvarnsagpvvaptngyf
rfdswvnqfytlapm

Sequence, based on observed residues (ATOM records): (download)

>d4x7fb_ b.121.4.0 (B:) automated matches {Norwalk virus [TaxId: 11983]}
skpftlpiltlgeltnsrfplpidvlytnpnesaivqcqngrctldgelqgttqllptgi
cafrgkvtqqvhrthwnmtvtnlngtpfdptedvpaplgtpdfsgqiygvisqrntlpan
raheaviatyspkftpklgniqfstwetqdvssgqptkftpvglasvdanshfdqwtlps
ysgaltlnmnlapsvapvfpgecllffrsfiplkggygnpaidclmpqewvqhlyqesap
slsdvalvryvnpetgrtlfeaklhrngfltvarnsagpvvaptngyfrfdswvnqfytl
apm

SCOPe Domain Coordinates for d4x7fb_:

Click to download the PDB-style file with coordinates for d4x7fb_.
(The format of our PDB-style files is described here.)

Timeline for d4x7fb_:

  • d4x7fb_ is new in SCOPe 2.08-stable