Lineage for d4rqqd_ (4rqq D:)

  1. Root: SCOPe 2.08
  2. 2739516Class b: All beta proteins [48724] (180 folds)
  3. 2739517Fold b.1: Immunoglobulin-like beta-sandwich [48725] (33 superfamilies)
    sandwich; 7 strands in 2 sheets; greek-key
    some members of the fold have additional strands
  4. 2739518Superfamily b.1.1: Immunoglobulin [48726] (5 families) (S)
  5. 2754035Family b.1.1.0: automated matches [191470] (1 protein)
    not a true family
  6. 2754036Protein automated matches [190740] (31 species)
    not a true protein
  7. 2754280Species Human (Homo sapiens) [TaxId:9606] [187920] (1793 PDB entries)
  8. 2759005Domain d4rqqd_: 4rqq D: [409564]
    Other proteins in same PDB: d4rqqa2, d4rqqc2, d4rqql2
    automated match to d6shgh_

Details for d4rqqd_

PDB Entry: 4rqq (more details), 3.1 Å

PDB Description: Crystal structure of human Fab PGDM1400, a broadly reactive and potent HIV-1 neutralizing antibody
PDB Compounds: (D:) Human anti-HIV-1 antibody PGDM1400 heavy chain

SCOPe Domain Sequences for d4rqqd_:

Sequence; same for both SEQRES and ATOM records: (download)

>d4rqqd_ b.1.1.0 (D:) automated matches {Human (Homo sapiens) [TaxId: 9606]}
qlvqsgpevrkpgtsvkvsckapgntlktydlhwvrsvpgqglqwmgwishegdkkvive
rfkakvtidwdrstntaylqlsgltsgdtavyycakgskhrlrdyalydddgalnwavdv
dylsnlefwgqgtavtvssastkgpsvfplapsskstsggtaalgclvkdyfpepvtvsw
nsgaltsgvhtfpavlqssglyslssvvtvpssslgtqtyicnvnhkpsntkvdkkve

SCOPe Domain Coordinates for d4rqqd_:

Click to download the PDB-style file with coordinates for d4rqqd_.
(The format of our PDB-style files is described here.)

Timeline for d4rqqd_:

  • d4rqqd_ is new in SCOPe 2.08-stable