Lineage for d4odsh_ (4ods H:)

  1. Root: SCOPe 2.08
  2. 2739516Class b: All beta proteins [48724] (180 folds)
  3. 2739517Fold b.1: Immunoglobulin-like beta-sandwich [48725] (33 superfamilies)
    sandwich; 7 strands in 2 sheets; greek-key
    some members of the fold have additional strands
  4. 2739518Superfamily b.1.1: Immunoglobulin [48726] (5 families) (S)
  5. 2739519Family b.1.1.1: V set domains (antibody variable domain-like) [48727] (33 proteins)
  6. 2742100Protein automated matches [190119] (23 species)
    not a true protein
  7. 2744177Species Mouse (Mus musculus) [TaxId:10090] [186842] (610 PDB entries)
  8. 2744529Domain d4odsh_: 4ods H: [409303]
    Other proteins in same PDB: d4odsl1, d4odsl2
    automated match to d6shgh_

Details for d4odsh_

PDB Entry: 4ods (more details), 1.94 Å

PDB Description: unliganded fab structure of lipid a-specific antibody s55-3
PDB Compounds: (H:) S55-3 Fab (IgG2b) heavy chain

SCOPe Domain Sequences for d4odsh_:

Sequence, based on SEQRES records: (download)

>d4odsh_ b.1.1.1 (H:) automated matches {Mouse (Mus musculus) [TaxId: 10090]}
evqlvesggdlvkpggslklscagsgitfsgygmswvrqtpdkslewvalisnggsyayy
sdsvkgrftisrdnakntlylqmsslrsddtaiyycarhkglrggtnamdywgqgtsvtv
ssakttppsvyplapgcgdttgssvtlgclvkgyfpesvtvtwnsgslsssvhtfpallq
sglytmsssvtvpsstwpsetvtcsvahpassttvdkkleps

Sequence, based on observed residues (ATOM records): (download)

>d4odsh_ b.1.1.1 (H:) automated matches {Mouse (Mus musculus) [TaxId: 10090]}
evqlvesggdlvkpggslklscagsgitfsgygmswvrqtpdkslewvalisnggsyayy
sdsvkgrftisrdnakntlylqmsslrsddtaiyycarhkglrggtnamdywgqgtsvtv
ssakttppsvyplapgcgdttgssvtlgclvkgyfpesvtvtwnsgssvhtfpallqsgl
ytmsssvtvpsstwpsetvtcsvahpassttvdkkleps

SCOPe Domain Coordinates for d4odsh_:

Click to download the PDB-style file with coordinates for d4odsh_.
(The format of our PDB-style files is described here.)

Timeline for d4odsh_:

  • d4odsh_ is new in SCOPe 2.08-stable