Lineage for d4od3h_ (4od3 H:)

  1. Root: SCOPe 2.08
  2. 2739516Class b: All beta proteins [48724] (180 folds)
  3. 2739517Fold b.1: Immunoglobulin-like beta-sandwich [48725] (33 superfamilies)
    sandwich; 7 strands in 2 sheets; greek-key
    some members of the fold have additional strands
  4. 2739518Superfamily b.1.1: Immunoglobulin [48726] (5 families) (S)
  5. 2739519Family b.1.1.1: V set domains (antibody variable domain-like) [48727] (33 proteins)
  6. 2742100Protein automated matches [190119] (24 species)
    not a true protein
  7. 2742214Species Human (Homo sapiens) [TaxId:9606] [188740] (709 PDB entries)
  8. 2743195Domain d4od3h_: 4od3 H: [409301]
    Other proteins in same PDB: d4od3l1, d4od3l2
    automated match to d6shgh_
    complexed with mes, zn

Details for d4od3h_

PDB Entry: 4od3 (more details), 2.62 Å

PDB Description: Crystal structure of human Fab CAP256-VRC26.07, a potent V1V2-directed HIV-1 neutralizing antibody
PDB Compounds: (H:) CAP256-VRC26.07 heavy chain

SCOPe Domain Sequences for d4od3h_:

Sequence, based on SEQRES records: (download)

>d4od3h_ b.1.1.1 (H:) automated matches {Human (Homo sapiens) [TaxId: 9606]}
vqlvesgggvvqpgrslrlscvgsqfsfnrygmhwvrqapgkglewvagisfdgtdryha
dnvwgrftisrdnskntlylqmsslraedtalyycakdlredeceewwsdyydfgkklpc
rksrgvagvfdkwgqgtmvtvssastkgpsvfplapsskstsggtaalgclvkdyfpepv
tvswnsgaltsgvhtfpavlqssglyslssvvtvpssslgtqtyicnvnhkpsntkvdkk
vepks

Sequence, based on observed residues (ATOM records): (download)

>d4od3h_ b.1.1.1 (H:) automated matches {Human (Homo sapiens) [TaxId: 9606]}
vqlvesgggvvqpgrslrlscvgsqfsfnrygmhwvrqapgkglewvagisfdgtdryha
dnvwgrftisrdnskntlylqmsslraedtalyycakdlredeceewpcrksrgvagvfd
kwgqgtmvtvssastkgpsvfplapsskstsggtaalgclvkdyfpepvtvswnsgalts
gvhtfpavlqssglyslssvvtvpssslgtqtyicnvnhkpsntkvdkkvepks

SCOPe Domain Coordinates for d4od3h_:

Click to download the PDB-style file with coordinates for d4od3h_.
(The format of our PDB-style files is described here.)

Timeline for d4od3h_:

  • d4od3h_ is new in SCOPe 2.08-stable