SCOPe 2.07: Domain d1dbxb_: 1dbx B:

Lineage for d1dbxb_ (1dbx B:)

1. Root: SCOPe 2.07

2. Class d: Alpha and beta proteins (a+b) [53931] (388 folds)

3. Fold d.116: YbaK/ProRS associated domain [55825] (1 superfamily)
   core: alpha-beta-alpha-beta(2)-(alpha-beta)2-alpha-beta(2)-alpha-beta; 3 layers; bifurcated mixed sheet

4. Superfamily d.116.1: YbaK/ProRS associated domain [55826] (2 families)

5. Family d.116.1.1: YbaK/ProRS associated domain [55827] (4 proteins)
   Pfam PF04073

6. Protein Hypothetical protein HI1434 (YbaK homologue) [55828] (1 species)

7. Species Haemophilus influenzae [TaxId:727] [55829] (2 PDB entries)

8. Domain d1dbxb_: 1dbx B: [40929]
   structural genomics

Details for d1dbxb_

PDB Entry: 1dbx, 1.8 Å

PDB Description: Crystal structure of cysteinyl-tRNA(Pro) deacylase from H. influenzae (HI1434)

PDB Compounds: (B:) cysteinyl-tRNA(Pro) deacylase

SCOPe Domain Sequences for d1dbxb_:

Sequence, based on SEQRES records:

>d1dbxb_ d.116.1.1 (B:) Hypothetical protein HI1434 (YbaK homologue) {Haemophilus influenzae [TaxId: 727]}
tpaidllkkqkipfilhtydhdpnnqhfgdeaaeklgidpnrsfktllvaengdqkklac
fvlatanmlnlkkaaksigvkkvemadkdaaqkstgylvggisplgqkkrvktvinstal
efetiyvsggkrglsveiapqdlakvlgaeftdivde

Sequence, based on observed residues (ATOM records):

>d1dbxb_ d.116.1.1 (B:) Hypothetical protein HI1434 (YbaK homologue) {Haemophilus influenzae [TaxId: 727]}
tpaidllkkqkipfilhtydhdpgdeaaeklgidpnrsfktllvaengdqkklacfvlat
anmlnlkkaaksigvkkvemadkdaaqkstgylvggisplgqkkrvktvinstalefeti
yvsggkrglsveiapqdlakvlgaeftdivde

Timeline for d1dbxb_:

• d1dbxb_ first appeared (with stable ids) in SCOP 1.55
  
• d1dbxb_ appears in SCOPe 2.06
  
• d1dbxb_ appears in the current release, SCOPe 2.08