Lineage for d4d9qe_ (4d9q E:)

  1. Root: SCOPe 2.08
  2. 2739516Class b: All beta proteins [48724] (180 folds)
  3. 2739517Fold b.1: Immunoglobulin-like beta-sandwich [48725] (33 superfamilies)
    sandwich; 7 strands in 2 sheets; greek-key
    some members of the fold have additional strands
  4. 2739518Superfamily b.1.1: Immunoglobulin [48726] (5 families) (S)
  5. 2754035Family b.1.1.0: automated matches [191470] (1 protein)
    not a true family
  6. 2754036Protein automated matches [190740] (31 species)
    not a true protein
  7. 2754280Species Human (Homo sapiens) [TaxId:9606] [187920] (1793 PDB entries)
  8. 2757163Domain d4d9qe_: 4d9q E: [408863]
    Other proteins in same PDB: d4d9qa_, d4d9qb_, d4d9qd2, d4d9ql2
    automated match to d6shgh_
    complexed with gol, so4, zn

Details for d4d9qe_

PDB Entry: 4d9q (more details), 2.28 Å

PDB Description: inhibiting alternative pathway complement activation by targeting the exosite on factor d
PDB Compounds: (E:) Anti-Factor D, heavy chain

SCOPe Domain Sequences for d4d9qe_:

Sequence, based on SEQRES records: (download)

>d4d9qe_ b.1.1.0 (E:) automated matches {Human (Homo sapiens) [TaxId: 9606]}
evqlvqsgpelkkpgasvkvsckasgytftnygmnwvrqapgqglewmgwintytgetty
addfkgrfvfsldtsvstaylqisslkaedtavyycereggvnnwgqgtlvtvssastkg
psvfplapsskstsggtaalgclvkdyfpepvtvswnsgaltsgvhtfpavlqssglysl
ssvvtvpssslgtqtyicnvnhkpsntkvdkkvepks

Sequence, based on observed residues (ATOM records): (download)

>d4d9qe_ b.1.1.0 (E:) automated matches {Human (Homo sapiens) [TaxId: 9606]}
evqlvqsgpelkkpgasvkvsckasgytftnygmnwvrqapgqglewmgwintytgetty
addfkgrfvfsldtsvstaylqisslkaedtavyycereggvnnwgqgtlvtvssastkg
psvfplapssgtaalgclvkdyfpepvtvswnsgaltsgvhtfpavlqssglyslssvvt
vpssslgtqtyicnvnhkpsntkvdkkvepks

SCOPe Domain Coordinates for d4d9qe_:

Click to download the PDB-style file with coordinates for d4d9qe_.
(The format of our PDB-style files is described here.)

Timeline for d4d9qe_:

  • d4d9qe_ is new in SCOPe 2.08-stable