Lineage for d2qqkh1 (2qqk H:1-213)

  1. Root: SCOPe 2.08
  2. 2739516Class b: All beta proteins [48724] (180 folds)
  3. 2739517Fold b.1: Immunoglobulin-like beta-sandwich [48725] (33 superfamilies)
    sandwich; 7 strands in 2 sheets; greek-key
    some members of the fold have additional strands
  4. 2739518Superfamily b.1.1: Immunoglobulin [48726] (5 families) (S)
  5. 2739519Family b.1.1.1: V set domains (antibody variable domain-like) [48727] (33 proteins)
  6. 2742100Protein automated matches [190119] (24 species)
    not a true protein
  7. 2742214Species Human (Homo sapiens) [TaxId:9606] [188740] (709 PDB entries)
  8. 2743115Domain d2qqkh1: 2qqk H:1-213 [408176]
    Other proteins in same PDB: d2qqkl1, d2qqkl2
    automated match to d6shgh_
    complexed with nag

Details for d2qqkh1

PDB Entry: 2qqk (more details), 2.75 Å

PDB Description: neuropilin-2 a1a2b1b2 domains in complex with a semaphorin-blocking fab
PDB Compounds: (H:) antibody heavy chain

SCOPe Domain Sequences for d2qqkh1:

Sequence, based on SEQRES records: (download)

>d2qqkh1 b.1.1.1 (H:1-213) automated matches {Human (Homo sapiens) [TaxId: 9606]}
evqlvesggglvqpggslrlscaasgftisgygihwvrqapgkglewvayiypdsgytdy
adsvkgrftisadtskntaylqmnslraedtavyycaredfrnrrrlwyvmdywgqgtlv
tvssastkgpsvfplapsskstsggtaalgclvkdyfpepvtvswnsgaltsgvhtfpav
lqssglyslssvvtvpssslgtqtyicnvnhkpsntkvdkkvep

Sequence, based on observed residues (ATOM records): (download)

>d2qqkh1 b.1.1.1 (H:1-213) automated matches {Human (Homo sapiens) [TaxId: 9606]}
evqlvesggglvqpggslrlscaasgftisgygihwvrqapgkglewvayiypdsgytdy
adsvkgrftisadtskntaylqmnslraedtavyycaredfrnrrrlwyvmdywgqgtlv
tvssastkgpsvfplapgtaalgclvkdyfpepvtvswnsgaltsgvhtfpavlqssgly
slssvvtvpssslgtqtyicnvnhkpsntkvdkkvep

SCOPe Domain Coordinates for d2qqkh1:

Click to download the PDB-style file with coordinates for d2qqkh1.
(The format of our PDB-style files is described here.)

Timeline for d2qqkh1:

  • d2qqkh1 is new in SCOPe 2.08-stable