Lineage for d1b8ab2 (1b8a B:1104-1438)

  1. Root: SCOPe 2.08
  2. Class d: Alpha and beta proteins (a+b) [53931] (396 folds)
  3. Fold d.104: Class II aaRS and biotin synthetases [55680] (1 superfamily)
    contains large mixed beta-sheet
  4. Superfamily d.104.1: Class II aaRS and biotin synthetases [55681] (5 families) (S)
  5. Family d.104.1.1: Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain [55682] (16 proteins)
  6. Protein Aspartyl-tRNA synthetase (AspRS) [55696] (5 species)
  7. Species Pyrococcus kodakaraensis [TaxId:311400] [55698] (1 PDB entry)
  8. Domain d1b8ab2: 1b8a B:1104-1438 [40766]
    Other proteins in same PDB: d1b8aa1, d1b8ab1
    complexed with atp, mn
    has additional insertions and/or extensions that are not grouped together

Details for d1b8ab2

PDB Entry: 1b8a (more details), 1.9 Å

PDB Description: aspartyl-trna synthetase
PDB Compounds: (B:) protein (aspartyl-tRNA synthetase)

SCOPe Domain Sequences for d1b8ab2:

Sequence; same for both SEQRES and ATOM records: (download)

>d1b8ab2 d.104.1.1 (B:1104-1438) Aspartyl-tRNA synthetase (AspRS) {Pyrococcus kodakaraensis [TaxId: 311400]}
plpldptgkvkaeldtrlnnrfmdlrrpevmaifkirssvfkavrdffhengfieihtpk
iiatateggtelfpmkyfeedaflaespqlykeimmasgldrvyeiapifraeehnttrh
lneawsidsemafiedeeevmsflerlvahainyvrehnakeldilnfeleepklpfprv
sydkaleilgdlgkeipwgedidtegerllgkymmenenaplyflyqypseakpfyimky
dnkpeicrafdleyrgveissggqrehrhdilveqikekglnpesfefylkafrygmpph
ggfglgaerlikqmldlpnirevilfprdrrrltp

SCOPe Domain Coordinates for d1b8ab2 are not available.

Timeline for d1b8ab2:

View in 3D
Domains from same chain:
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d1b8ab1
View in 3D
Domains from other chains:
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d1b8aa1, d1b8aa2