Lineage for d1ggma2 (1ggm A:1-394)

  1. Root: SCOPe 2.06
  2. 2170735Class d: Alpha and beta proteins (a+b) [53931] (385 folds)
  3. 2208545Fold d.104: Class II aaRS and biotin synthetases [55680] (1 superfamily)
    contains large mixed beta-sheet
  4. 2208546Superfamily d.104.1: Class II aaRS and biotin synthetases [55681] (5 families) (S)
  5. 2208547Family d.104.1.1: Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain [55682] (16 proteins)
  6. 2208606Protein Glycyl-tRNA synthetase (GlyRS) [55692] (1 species)
  7. 2208607Species Thermus thermophilus [TaxId:274] [55693] (3 PDB entries)
  8. 2208612Domain d1ggma2: 1ggm A:1-394 [40749]
    Other proteins in same PDB: d1ggma1, d1ggmb1
    protein/RNA complex; complexed with gap

Details for d1ggma2

PDB Entry: 1ggm (more details), 3.4 Å

PDB Description: glycyl-trna synthetase from thermus thermophilus complexed with glycyl-adenylate
PDB Compounds: (A:) protein (glycyl-tRNA synthetase)

SCOPe Domain Sequences for d1ggma2:

Sequence; same for both SEQRES and ATOM records: (download)

>d1ggma2 d.104.1.1 (A:1-394) Glycyl-tRNA synthetase (GlyRS) {Thermus thermophilus [TaxId: 274]}
aassldelvalckrrgfifqsseiygglqgvydygplgvelknnlkqawwrrnvyerddm
egldasvlthrlvlhysgheatfadpmvdnakarywtppryfnmmfqdlrgprggrglla
ylrpetaqgifvnfknvldatsrklgfgiaqigkafrneitprnfifrvrefeqmeieyf
vrpgedeywhrywveerlkwwqemglsrenlvpyqqppessahyakatvdilyrfphgsl
elegiaqrtdfdlgshtkdqealgitarvlrnehstqrlayrdpetgkwfvpyviepsag
vdrgvlallaeaftreelpngeerivlklkp

SCOPe Domain Coordinates for d1ggma2:

Click to download the PDB-style file with coordinates for d1ggma2.
(The format of our PDB-style files is described here.)

Timeline for d1ggma2:

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Domains from same chain:
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d1ggma1