SCOPe 2.08: Domain d1adyd2: 1ady D:2-325

Lineage for d1adyd2 (1ady D:2-325)

1. Root: SCOPe 2.08

2. Class d: Alpha and beta proteins (a+b) [53931] (396 folds)

3. Fold d.104: Class II aaRS and biotin synthetases [55680] (1 superfamily)
   contains large mixed beta-sheet

4. Superfamily d.104.1: Class II aaRS and biotin synthetases [55681] (5 families)

5. Family d.104.1.1: Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain [55682] (16 proteins)

6. Protein Histidyl-tRNA synthetase (HisRS) [55688] (4 species)

7. Species Thermus thermophilus [TaxId:274] [55691] (3 PDB entries)

8. Domain d1adyd2: 1ady D:2-325 [40744]
   Other proteins in same PDB: d1adya1, d1adyb1, d1adyc1, d1adyd1
   protein/RNA complex; complexed with ham, so4
   has additional subdomain(s) that are not in the common domain

Details for d1adyd2

PDB Entry: 1ady, 2.8 Å

PDB Description: histidyl-trna synthetase in complex with histidyl-adenylate

PDB Compounds: (D:) histidyl-tRNA synthetase

SCOPe Domain Sequences for d1adyd2:

Sequence; same for both SEQRES and ATOM records:

>d1adyd2 d.104.1.1 (D:2-325) Histidyl-tRNA synthetase (HisRS) {Thermus thermophilus [TaxId: 274]}
taravrgtkdlfgkelrmhqrivatarkvleaagalelvtpifeetqvfekgvgaatdiv
rkemftfqdrggrsltlrpegtaamvraylehgmkvwpqpvrlwmagpmfraerpqkgry
rqfhqvnyealgsenpildaeavvllyeclkelglrrlkvklssvgdpedrarynaylre
vlsphrealsedskerleenpmrildskserdqallkelgvrpmldflgeearahlkeve
rhlerlsvpyelepalvrgldyyvrtafevhheeigaqsalggggrydglsellggprvp
gvgfafgvervalaleaegfglpe

Timeline for d1adyd2:

• d1adyd2 first appeared (with stable ids) in SCOP 1.55
  
• d1adyd2 appears in SCOPe 2.07