SCOPe 2.08: Domain d1kmmd2: 1kmm D:4-325

Lineage for d1kmmd2 (1kmm D:4-325)

1. Root: SCOPe 2.08

2. Class d: Alpha and beta proteins (a+b) [53931] (396 folds)

3. Fold d.104: Class II aaRS and biotin synthetases [55680] (1 superfamily)
   contains large mixed beta-sheet

4. Superfamily d.104.1: Class II aaRS and biotin synthetases [55681] (5 families)

5. Family d.104.1.1: Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain [55682] (16 proteins)

6. Protein Histidyl-tRNA synthetase (HisRS) [55688] (4 species)

7. Species Escherichia coli [TaxId:562] [55689] (4 PDB entries)

8. Domain d1kmmd2: 1kmm D:4-325 [40726]
   Other proteins in same PDB: d1kmma1, d1kmmb1, d1kmmc1, d1kmmd1
   protein/RNA complex; complexed with ham

Details for d1kmmd2

PDB Entry: 1kmm, 2.6 Å

PDB Description: histidyl-trna synthetase complexed with histidyl-adenylate

PDB Compounds: (D:) histidyl-tRNA synthetase

SCOPe Domain Sequences for d1kmmd2:

Sequence, based on SEQRES records:

>d1kmmd2 d.104.1.1 (D:4-325) Histidyl-tRNA synthetase (HisRS) {Escherichia coli [TaxId: 562]}
niqairgmndylpgetaiwqriegtlknvlgsygyseirlpiveqtplfkraigevtdvv
ekemytfedrngdsltlrpegtagcvragiehgllynqeqrlwyigpmfrherpqkgryr
qfhqlgcevfglqgpdidaelimltarwwralgisehvtlelnsigslearanyrdalva
fleqhkekldedckrrmytnplrvldsknpevqallndapalgdyldeesrehfaglckl
lesagiaytvnqrlvrgldyynrtvfewvtnslgsqgtvcaggrydglveqlggratpav
gfamglerlvllvqavnpefka

Sequence, based on observed residues (ATOM records):

>d1kmmd2 d.104.1.1 (D:4-325) Histidyl-tRNA synthetase (HisRS) {Escherichia coli [TaxId: 562]}
niqairgmndylpgetaiwqriegtlknvlgsygyseirlpiveqtplfkraigevtdvv
ekemytfedrngdsltlrpegtagcvragiehgllynqeqrlwyigpmfrherpqkgryr
qfhqlgcevfglqgpdidaelimltarwwralgisehvtlelnsigldeesrehfaglck
llesagiaytvnqrlvrgldyynrtvfewvtnslgsqgtvcaggrydglveqlggratpa
vgfamglerlvllvqavnpefka

Timeline for d1kmmd2:

• d1kmmd2 first appeared (with stable ids) in SCOP 1.55
  
• d1kmmd2 appears in SCOPe 2.07