SCOP 1.75: Domain d1bbwa2: 1bbw A:161-502

Lineage for d1bbwa2 (1bbw A:161-502)

1. Root: SCOP 1.75

2. Class d: Alpha and beta proteins (a+b) [53931] (376 folds)

3. Fold d.104: Class II aaRS and biotin synthetases [55680] (1 superfamily)
   contains large mixed beta-sheet

4. Superfamily d.104.1: Class II aaRS and biotin synthetases [55681] (4 families)

5. Family d.104.1.1: Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain [55682] (15 proteins)

6. Protein Lysyl-tRNA synthetase (LysRS) [55685] (2 species)
   contains an insertion of LEM/SAP-like HeH motif, residues 337-379

7. Species Escherichia coli, gene lysS [TaxId:562] [55687] (2 PDB entries)

8. Domain d1bbwa2: 1bbw A:161-502 [40722]
   Other proteins in same PDB: d1bbwa1

Details for d1bbwa2

PDB Entry: 1bbw, 2.7 Å

PDB Description: lysyl-trna synthetase (lyss)

PDB Compounds: (A:) protein (lysyl-tRNA synthetase)

SCOP Domain Sequences for d1bbwa2:

Sequence, based on SEQRES records:

>d1bbwa2 d.104.1.1 (A:161-502) Lysyl-tRNA synthetase (LysRS) {Escherichia coli, gene lysS [TaxId: 562]}
dqearyrqryldlisndesrntfkvrsqilsgirqfmvnrgfmevetpmmqvipggaaar
pfithhnaldldmylriapelylkrlvvggfervfeinrnfrnegisvrhnpeftmmely
mayadykdlielteslfrtlaqdilgktevtygdvtldfgkpfekltmreaikkyrpetd
madldnfdsakaiaesigihvekswglgrivteifeevaeahliqptfiteypaevspla
rrndvnpeitdrfeffiggreigngfselndaedqaqrfldqvaakdagddeamfydedy
vtalehglpptaglgigidrmvmlftnshtirdvilfpamrp

Sequence, based on observed residues (ATOM records):

>d1bbwa2 d.104.1.1 (A:161-502) Lysyl-tRNA synthetase (LysRS) {Escherichia coli, gene lysS [TaxId: 562]}
dqearyrqryldlisndesrntfkvrsqilsgirqfmvnrgfmevetpmmqvipaarpfi
thhnaldldmylriapelylkrlvvggfervfeinrnfrnegisvhnpeftmmelymaya
dykdlielteslfrtlaqdilgktevtygdvtldfgkpfekltmreaikkyrpetdmadl
dnfdsakaiaesigihvekswglgrivteifeevaeahliqptfiteypaevsplarrnd
vnpeitdrfeffiggreigngfselndaedqaqrfldqvydedyvtalehglpptaglgi
gidrmvmlftnshtirdvilfpamrp

Timeline for d1bbwa2:

• d1bbwa2 first appeared (with stable ids) in SCOP 1.55
  
• d1bbwa2 appears in SCOP 1.73
  
• d1bbwa2 appears in SCOPe 2.01
  
• d1bbwa2 appears in the current release, SCOPe 2.08