SCOP 1.55: Domain d1lylb2: 1lyl B:154-502

Lineage for d1lylb2 (1lyl B:154-502)

1. Root: SCOP 1.55

2. Class d: Alpha and beta proteins (a+b) [53931] (184 folds)

3. Fold d.104: Class II aaRS and biotin synthetases [55680] (1 superfamily)

4. Superfamily d.104.1: Class II aaRS and biotin synthetases [55681] (2 families)

5. Family d.104.1.1: Class II aminoacyl-tRNA synthetase (aaRS)-like, catalyic domain [55682] (9 proteins)

6. Protein Lysyl-tRNA synthetase (LysRS) [55685] (2 species)

7. Species Escherichia coli, gene lysU [TaxId:562] [55686] (5 PDB entries)

8. Domain d1lylb2: 1lyl B:154-502 [40718]
   Other proteins in same PDB: d1lyla1, d1lylb1, d1lylc1

Details for d1lylb2

PDB Entry: 1lyl, 2.8 Å

PDB Description: lysyl-trna synthetase (lysu) (e.c.6.1.1.6) complexed with lysine

SCOP Domain Sequences for d1lylb2:

Sequence, based on SEQRES records:

>d1lylb2 d.104.1.1 (B:154-502) Lysyl-tRNA synthetase (LysRS) {Escherichia coli, gene lysU}
dkfhglqdqevryrqryldliandksrqtfvvrskilaairqfmvargfmevetpmmqvi
pggasarpfithhnaldldmylriapelylkrlvvggfervfeinrnfrnegisvrhnpe
ftmmelymayadyhdlielteslfrtlaqevlgttkvtygehvfdfgkpfekltmreaik
kyrpetdmadldnfdaakalaesigitvekswglgrivteifdevaeahliqptfiteyp
aevsplarrndvnpeitdrfeffiggreigngfselndaedqaerfqeqvnakaagddea
mfydedyvtaleyglpptaglgigidrmimlftnshtirdvilfpamrp

Sequence, based on observed residues (ATOM records):

>d1lylb2 d.104.1.1 (B:154-502) Lysyl-tRNA synthetase (LysRS) {Escherichia coli, gene lysU}
ddqevryrqryldliandksrqtfvvrskilaairqfmvargfmevetpmmqvipggasa
rpfithhnaldldmylriapelylkrlvvggfervfeinrnfrnegisvrhnpeftmmel
ymayadyhdlielteslfrtlaqevlgttkvtygehvfdfgkpfekltmreaikkyrpet
dmadldnfdaakalaesigitvekswglgrivteifdevaeahliqptfiteypaevspl
arrndvnpeitdrfeffiggreigngfselndaedqaerfqeqvnakaagddeamfyded
yvtaleyglpptaglgigidrmimlftnshtirdvilfpamrp

Timeline for d1lylb2:

• d1lylb2 appears in SCOP 1.57
  
• d1lylb2 appears in the current release, SCOPe 2.08