SCOPe 2.08: Domain d5s5gf2: 5s5g F:77-378

Lineage for d5s5gf2 (5s5g F:77-378)

1. Root: SCOPe 2.08

2. Class d: Alpha and beta proteins (a+b) [53931] (396 folds)

3. Fold d.142: ATP-grasp [56058] (2 superfamilies)
   Consists of two subdomains with different alpha+beta folds
   shares functional and structural similarities with the PIPK and protein kinase superfamilies

4. Superfamily d.142.1: Glutathione synthetase ATP-binding domain-like [56059] (11 families)

5. Family d.142.1.10: Tubulin tyrosine ligase (TTL) C-terminal domain-like [310626] (2 proteins)
   Pfam PF03133; PubMed 22020298

6. Protein Tubulin tyrosine ligase (TTL) C-terminal domain [310728] (3 species)

7. Species Chicken (Gallus gallus) [TaxId:9031] [311385] (176 PDB entries)

8. Domain d5s5gf2: 5s5g F:77-378 [406812]
   Other proteins in same PDB: d5s5ga1, d5s5ga2, d5s5gb1, d5s5gb2, d5s5gc1, d5s5gc2, d5s5gd1, d5s5gd2, d5s5ge_, d5s5gf1, d5s5gf3
   automated match to d3tiia2
   complexed with acp, ca, gdp, gtp, mes, mg, szy

Details for d5s5gf2

PDB Entry: 5s5g, 2.69 Å

PDB Description: tubulin-z1129283193-complex

PDB Compounds: (F:) Tubulin-tyrosine ligase

SCOPe Domain Sequences for d5s5gf2:

Sequence, based on SEQRES records:

>d5s5gf2 d.142.1.10 (F:77-378) Tubulin tyrosine ligase (TTL) C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]}
lvkliktspelsesctwfpesyviyptnlktpvapaqngirhlinntrtderevflaayn
rrregregnvwiakssagakgegilisseaselldfideqgqvhviqkylekplllepgh
rkfdirswvlvdhlyniylyregvlrtssepynsanfqdktchltnhciqkeysknygry
eegnemffeefnqylmdalnttlensillqikhiirsclmciepaistkhlhyqsfqlfg
fdfmvdeelkvwlievngapacaqklyaelcqgivdvaissvfpladtgqktsqptsifi
kl

Sequence, based on observed residues (ATOM records):

>d5s5gf2 d.142.1.10 (F:77-378) Tubulin tyrosine ligase (TTL) C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]}
lvkliktspelsesctwfpesyviyptderevflaaynrrregregnvwiakssagagil
isseaselldfideqgqvhviqkylekplllepghrkfdirswvlvdhlyniylyregvl
rtssepynsanfqdktchltnhciqkeysknygryeegnemffeefnqylmdalnttlen
sillqikhiirsclmciepaistkhlhyqsfqlfgfdfmvdeelkvwlievngapacaqk
lyaelcqgivdvaissvfplasifikl

Timeline for d5s5gf2:

• d5s5gf2 first appeared in SCOPe 2.07