SCOPe 2.08: Domain d5s55b2: 5s55 B:246-437

Lineage for d5s55b2 (5s55 B:246-437)

1. Root: SCOPe 2.08

2. Class d: Alpha and beta proteins (a+b) [53931] (396 folds)

3. Fold d.79: Bacillus chorismate mutase-like [55297] (9 superfamilies)
   core: beta-alpha-beta-alpha-beta(2); mixed beta-sheet: order: 1423, strand 4 is antiparallel to the rest

4. Superfamily d.79.2: Tubulin C-terminal domain-like [55307] (2 families)

5. Family d.79.2.1: Tubulin, C-terminal domain [55308] (4 proteins)

6. Protein automated matches [227071] (7 species)
   not a true protein

7. Species Cow (Bos taurus) [TaxId:9913] [226565] (136 PDB entries)

8. Domain d5s55b2: 5s55 B:246-437 [406625]
   Other proteins in same PDB: d5s55a1, d5s55b1, d5s55c1, d5s55d1, d5s55e_, d5s55f1, d5s55f2, d5s55f3
   automated match to d3rycd2
   complexed with acp, ca, gdp, gtp, mg, wzp

Details for d5s55b2

PDB Entry: 5s55, 2.3 Å

PDB Description: tubulin-z106307058-complex

PDB Compounds: (B:) Tubulin beta-2B chain

SCOPe Domain Sequences for d5s55b2:

Sequence, based on SEQRES records:

>d5s55b2 d.79.2.1 (B:246-437) automated matches {Cow (Bos taurus) [TaxId: 9913]}
gqlnadlrklavnmvpfprlhffmpgfapltsrgsqqyraltvpeltqqmfdsknmmaac
dprhgryltvaaifrgrmsmkevdeqmlnvqnknssyfvewipnnvktavcdipprglkm
satfignstaiqelfkriseqftamfrrkaflhwytgegmdemefteaesnmndlvseyq
qyqd

Sequence, based on observed residues (ATOM records):

>d5s55b2 d.79.2.1 (B:246-437) automated matches {Cow (Bos taurus) [TaxId: 9913]}
gqlnadlrklavnmvpfprlhffmpgfapltsrqqyraltvpeltqqmfdsknmmaacdp
rhgryltvaaifrgrmsmkevdeqmlnvqnknssyfvewipnnvktavcdipprglkmsa
tfignstaiqelfkriseqftamfrrkaflhwytgegmdemefteaesnmndlvseyqqy
qd

Timeline for d5s55b2:

• d5s55b2 first appeared in SCOPe 2.07