Lineage for d5s4pf2 (5s4p F:77-378)

  1. Root: SCOPe 2.07
  2. 2530962Class d: Alpha and beta proteins (a+b) [53931] (388 folds)
  3. 2585054Fold d.142: ATP-grasp [56058] (2 superfamilies)
    Consists of two subdomains with different alpha+beta folds
    shares functional and structural similarities with the PIPK and protein kinase superfamilies
  4. 2585055Superfamily d.142.1: Glutathione synthetase ATP-binding domain-like [56059] (11 families) (S)
  5. 2585417Family d.142.1.10: Tubulin tyrosine ligase (TTL) C-terminal domain-like [310626] (2 proteins)
    Pfam PF03133; PubMed 22020298
  6. 2585418Protein Tubulin tyrosine ligase (TTL) C-terminal domain [310728] (3 species)
  7. 2585419Species Chicken (Gallus gallus) [TaxId:9031] [311385] (158 PDB entries)
  8. 2585442Domain d5s4pf2: 5s4p F:77-378 [406486]
    Other proteins in same PDB: d5s4pa1, d5s4pa2, d5s4pb1, d5s4pb2, d5s4pc1, d5s4pc2, d5s4pd1, d5s4pd2, d5s4pe_, d5s4pf1, d5s4pf3
    automated match to d3tiia2
    complexed with acp, ca, gdp, gtp, mes, mg, wny

Details for d5s4pf2

PDB Entry: 5s4p (more details), 2.29 Å

PDB Description: tubulin-z275165822-complex
PDB Compounds: (F:) Tubulin-tyrosine ligase

SCOPe Domain Sequences for d5s4pf2:

Sequence, based on SEQRES records: (download)

>d5s4pf2 d.142.1.10 (F:77-378) Tubulin tyrosine ligase (TTL) C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]}
lvkliktspelsesctwfpesyviyptnlktpvapaqngirhlinntrtderevflaayn
rrregregnvwiakssagakgegilisseaselldfideqgqvhviqkylekplllepgh
rkfdirswvlvdhlyniylyregvlrtssepynsanfqdktchltnhciqkeysknygry
eegnemffeefnqylmdalnttlensillqikhiirsclmciepaistkhlhyqsfqlfg
fdfmvdeelkvwlievngapacaqklyaelcqgivdvaissvfpladtgqktsqptsifi
kl

Sequence, based on observed residues (ATOM records): (download)

>d5s4pf2 d.142.1.10 (F:77-378) Tubulin tyrosine ligase (TTL) C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]}
lvkliktspelsesctwfpesyviyptderevflaaynrrregregnvwiakssagagil
isseaselldfideqgqvhviqkylekplllepghrkfdirswvlvdhlyniylyregvl
rtssepynsanfqdktchltnhciqkeysknygryeegnemffeefnqylmdalnttlen
sillqikhiirsclmciepaistkhlhyqsfqlfgfdfmvdeelkvwlievngapacaqk
lyaelcqgivdvaissvfplaptsifikl

SCOPe Domain Coordinates for d5s4pf2:

Click to download the PDB-style file with coordinates for d5s4pf2.
(The format of our PDB-style files is described here.)

Timeline for d5s4pf2: