SCOPe 2.08: Domain d5s4vf1: 5s4v F:1-76

Lineage for d5s4vf1 (5s4v F:1-76)

1. Root: SCOPe 2.08

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.30: PreATP-grasp domain [52439] (1 superfamily)
   3 layers: a/b/a; parallel or mixed beta-sheet of 4 to 6 strands
   possible rudiment form of Rossmann-fold domain

4. Superfamily c.30.1: PreATP-grasp domain [52440] (10 families)
   precedes the ATP-grasp domain common to all superfamily members, can contain a substrate-binding function

5. Family c.30.1.9: Tubulin tyrosine ligase (TTL) N-terminal domain-like [310625] (1 protein)

6. Protein Tubulin tyrosine ligase (TTL) N-terminal domain [310727] (2 species)

7. Species Chicken (Gallus gallus) [TaxId:9031] [311384] (188 PDB entries)

8. Domain d5s4vf1: 5s4v F:1-76 [406317]
   Other proteins in same PDB: d5s4va1, d5s4va2, d5s4vb1, d5s4vb2, d5s4vc1, d5s4vc2, d5s4vd1, d5s4vd2, d5s4ve_, d5s4vf2, d5s4vf3
   automated match to d3tiia1
   complexed with 9ks, acp, ca, gdp, gtp, mes, mg

Details for d5s4vf1

PDB Entry: 5s4v, 2.3 Å

PDB Description: tubulin-z57040482-complex

PDB Compounds: (F:) Tubulin-tyrosine ligase

SCOPe Domain Sequences for d5s4vf1:

Sequence; same for both SEQRES and ATOM records:

>d5s4vf1 c.30.1.9 (F:1-76) Tubulin tyrosine ligase (TTL) N-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]}
mytfvvrdenssvyaevsrlllatgqwkrlrkdnprfnlmlgernrlpfgrlghepglvq
lvnyyrgadklcrkas

Timeline for d5s4vf1:

• d5s4vf1 first appeared in SCOPe 2.07