Lineage for d7d5ra3 (7d5r A:294-664)

  1. Root: SCOPe 2.08
  2. 2923792Class d: Alpha and beta proteins (a+b) [53931] (396 folds)
  3. 2974297Fold d.126: Pentein, beta/alpha-propeller [55908] (1 superfamily)
    duplication: composed of 5 alpha-beta(2)-alpha-beta units arranged around pseudo fivefold axis
  4. 2974298Superfamily d.126.1: Pentein [55909] (8 families) (S)
  5. 2974447Family d.126.1.0: automated matches [191334] (1 protein)
    not a true family
  6. 2974448Protein automated matches [190175] (10 species)
    not a true protein
  7. 2974468Species Human (Homo sapiens) [TaxId:9606] [187904] (35 PDB entries)
  8. 2974517Domain d7d5ra3: 7d5r A:294-664 [404928]
    Other proteins in same PDB: d7d5ra1, d7d5ra2, d7d5rb1, d7d5rb2
    automated match to d3b1ua3
    complexed with ca, cl, gol; mutant

Details for d7d5ra3

PDB Entry: 7d5r (more details), 3.15 Å

PDB Description: structure of the ca2+-bound c646a mutant of peptidylarginine deiminase type iii (pad3)
PDB Compounds: (A:) Protein-arginine deiminase type-3

SCOPe Domain Sequences for d7d5ra3:

Sequence, based on SEQRES records: (download)

>d7d5ra3 d.126.1.0 (A:294-664) automated matches {Human (Homo sapiens) [TaxId: 9606]}
apwimtpstlpplevyvcrvrnntcfvdavaelarkagcklticpqaenrndrwiqdeme
lgyvqaphktlpvvfdsprngelqdfpykrilgpdfgyvtreprdrsvsgldsfgnlevs
ppvvangkeyplgriliggnlpgssgrrvtqvvrdflhaqkvqppvelfvdwlavghvde
flsfvpapdgkgfrmllaspgacfklfqekqkcghgrallfqgvvddeqvktisinqvls
nkdlinynkfvqscidwnrevlkrelglaecdiidipqlfkterkkataffpdlvnmlvl
gkhlgipkpfgpiingcccleekvrslleplglhctfiddftpyhmlhgevhagtnvcrk
pfsfkwwnmvp

Sequence, based on observed residues (ATOM records): (download)

>d7d5ra3 d.126.1.0 (A:294-664) automated matches {Human (Homo sapiens) [TaxId: 9606]}
apwimtpstlpplevyvcntcfvdavaelarkagcklticpqawiqdemelgyvqaphkt
lpvvfdsprnlqdfpykrilgpdfgyvtreprgldsfgnlevsppvvangkeyplgrili
ggnlpgrrvtqvvrdflhaqkvqppvelfvdwlavghvdeflsfvpapdgkgfrmllasp
gacfklfqekqkcghgrallfqgvvdvktisinqvlsnkdlinynkfvqscidwnrevlk
relglaecdiidipqlfkterkkataffpdlvnmlvlgkhlgipkpfgpiingcccleek
vrslleplglhctfiddftpyhmlhgevhagtnvcrkpfsfkwwnmvp

SCOPe Domain Coordinates for d7d5ra3:

Click to download the PDB-style file with coordinates for d7d5ra3.
(The format of our PDB-style files is described here.)

Timeline for d7d5ra3: