SCOPe 2.08: Domain d7a6da_: 7a6d A:

Lineage for d7a6da_ (7a6d A:)

1. Root: SCOPe 2.08

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.1: TIM beta/alpha-barrel [51350] (34 superfamilies)
   contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
   the first seven superfamilies have similar phosphate-binding sites

4. Superfamily c.1.20: tRNA-guanine transglycosylase [51713] (1 family)

5. Family c.1.20.1: tRNA-guanine transglycosylase [51714] (2 proteins)

6. Protein Queosine tRNA-guanine transglycosylase [51715] (3 species)
   contains zinc-binding subdomain

7. Species Zymomonas mobilis [TaxId:542] [51716] (156 PDB entries)
   Uniprot P28720

8. Domain d7a6da_: 7a6d A: [404403]
   automated match to d5lpta_
   protein/RNA complex; complexed with edo, gol, r1e, rgn, zn; mutant

Details for d7a6da_

PDB Entry: 7a6d, 1.59 Å

PDB Description: trna-guanine transglycosylase c158s/c281s/y330c/h333a mutant in complex with rac-trans-4,4-difluorocyclopentane-1,2-diol

PDB Compounds: (A:) Queuine tRNA-ribosyltransferase

SCOPe Domain Sequences for d7a6da_:

Sequence, based on SEQRES records:

>d7a6da_ c.1.20.1 (A:) Queosine tRNA-guanine transglycosylase {Zymomonas mobilis [TaxId: 542]}
drprfsfsiaaregkartgtiemkrgvirtpafmpvgtaatvkalkpetvratgadiilg
ntyhlmlrpgaeriaklgglhsfmgwdrpiltdsggyqvmslssltkqseegvtfkshld
gsrhmlspersieiqhllgsdivmafdestpypatpsraassmersmrwakrsrdafdsr
keqaenaalfgiqqgsvfenlrqqsadalaeigfdgyavgglavgegqdemfrvldfsvp
mlpddkphylmgvgkpddivgavergidmfdsvlptrsgrngqaftwdgpinirnarfse
dlkpldsechcavcqkwsracihalirageilgamlmtehniafyqqlmqkirdsisegr
fsqfaqdfraryfarns

Sequence, based on observed residues (ATOM records):

>d7a6da_ c.1.20.1 (A:) Queosine tRNA-guanine transglycosylase {Zymomonas mobilis [TaxId: 542]}
drprfsfsiaaregkartgtiemkrgvirtpafmpvgtalkpetvratgadiilgntyhl
mlrpgaeriaklgglhsfmgwdrpiltdsggyqvmslssltkqseegvtfkshldgsrhm
lspersieiqhllgsdivmafdestpypatpsraassmersmrwakrsrdafdsrkeqae
naalfgiqqgsvfenlrqqsadalaeigfdgyavgglavgegqdemfrvldfsvpmlpdd
kphylmgvgkpddivgavergidmfdsvlptrsgrngqaftwdgpinirnarfsedlkpl
dsechcavcqkwsracihalirageilgamlmtehniafyqqlmqkirdsisegrfsqfa
qdfraryfarns

Timeline for d7a6da_:

• d7a6da_ first appeared in SCOPe 2.07