SCOPe 2.08: Domain d7m3ic_: 7m3i C:

Lineage for d7m3ic_ (7m3i C:)

1. Root: SCOPe 2.08

2. Class d: Alpha and beta proteins (a+b) [53931] (396 folds)

3. Fold d.318: SARS receptor-binding domain-like [143586] (1 superfamily)
   core: 3 layers, a/b/a; antiparallel beta-sheet of 5 strands, order 13542

4. Superfamily d.318.1: SARS receptor-binding domain-like [143587] (1 family)
   automatically mapped to Pfam PF09408

5. Family d.318.1.1: SARS receptor-binding domain-like [143588] (2 proteins)
   part of PfamB PB000266

6. Protein Spike protein S1 [143589] (5 species)

7. Species Severe acute respiratory syndrome coronavirus 2 [TaxId:2697049] [382292] (118 PDB entries)

8. Domain d7m3ic_: 7m3i C: [403666]
   Other proteins in same PDB: d7m3ia_, d7m3ib1, d7m3ib2, d7m3ih_, d7m3il1, d7m3il2
   automated match to d2dd8s1
   complexed with nag

Details for d7m3ic_

PDB Entry: 7m3i, 2.8 Å

PDB Description: structure of sars-cov-2 spike protein receptor binding domain in complex with a neutralizing antibody, cv2-75 fab

PDB Compounds: (C:) Spike protein S1

SCOPe Domain Sequences for d7m3ic_:

Sequence; same for both SEQRES and ATOM records:

>d7m3ic_ d.318.1.1 (C:) Spike protein S1 {Severe acute respiratory syndrome coronavirus 2 [TaxId: 2697049]}
qptesivrfpnitnlcpfgevfnatrfasvyawnrkrisncvadysvlynsasfstfkcy
gvsptklndlcftnvyadsfvirgdevrqiapgqtgkiadynyklpddftgcviawnsnn
ldskvggnynylyrlfrksnlkpferdisteiyqagstpcngvegfncyfplqsygfqpt
ngvgyqpyrvvvlsfellhapatvcgpkkstnlvknk

Timeline for d7m3ic_:

• d7m3ic_ first appeared in SCOPe 2.07