Lineage for d1japa_ (1jap A:)

  1. Root: SCOPe 2.05
  2. 1886641Class d: Alpha and beta proteins (a+b) [53931] (381 folds)
  3. 1917420Fold d.92: Zincin-like [55485] (2 superfamilies)
    contains mixed beta sheet with connection over free side of the sheet
  4. 1917421Superfamily d.92.1: Metalloproteases ("zincins"), catalytic domain [55486] (18 families) (S)
  5. 1917931Family d.92.1.11: Matrix metalloproteases, catalytic domain [55528] (14 proteins)
  6. 1918172Protein Neutrophil collagenase (MMP-8) [55532] (1 species)
  7. 1918173Species Human (Homo sapiens) [TaxId:9606] [55533] (23 PDB entries)
  8. 1918182Domain d1japa_: 1jap A: [40349]
    complexed with ca, zn

Details for d1japa_

PDB Entry: 1jap (more details), 1.82 Å

PDB Description: complex of pro-leu-gly-hydroxylamine with the catalytic domain of matrix metallo proteinase-8 (met80 form)
PDB Compounds: (A:) matrix metallo proteinase-8 (met80 form)

SCOPe Domain Sequences for d1japa_:

Sequence; same for both SEQRES and ATOM records: (download)

>d1japa_ d.92.1.11 (A:) Neutrophil collagenase (MMP-8) {Human (Homo sapiens) [TaxId: 9606]}
pkwertnltyrirnytpqlseaeveraikdafelwsvaspliftrisqgeadiniafyqr
dhgdnspfdgpngilahafqpgqgiggdahfdaeetwtntsanynlflvaahefghslgl
ahssdpgalmypnyafretsnyslpqddidgiqaiyg

SCOPe Domain Coordinates for d1japa_:

Click to download the PDB-style file with coordinates for d1japa_.
(The format of our PDB-style files is described here.)

Timeline for d1japa_: