Lineage for d1ayka_ (1ayk A:)

  1. Root: SCOPe 2.07
  2. 2530962Class d: Alpha and beta proteins (a+b) [53931] (388 folds)
  3. 2570195Fold d.92: Zincin-like [55485] (2 superfamilies)
    contains mixed beta sheet with connection over free side of the sheet
  4. 2570196Superfamily d.92.1: Metalloproteases ("zincins"), catalytic domain [55486] (18 families) (S)
  5. 2570846Family d.92.1.11: Matrix metalloproteases, catalytic domain [55528] (14 proteins)
  6. 2570956Protein Fibroblast collagenase (MMP-1) [55529] (2 species)
  7. 2570957Species Human (Homo sapiens) [TaxId:9606] [55530] (13 PDB entries)
    Uniprot P03956 32-466
  8. 2570974Domain d1ayka_: 1ayk A: [40345]
    complexed with ca, zn

Details for d1ayka_

PDB Entry: 1ayk (more details)

PDB Description: inhibitor-free catalytic fragment of human fibroblast collagenase, nmr, 30 structures
PDB Compounds: (A:) collagenase

SCOPe Domain Sequences for d1ayka_:

Sequence; same for both SEQRES and ATOM records: (download)

>d1ayka_ d.92.1.11 (A:) Fibroblast collagenase (MMP-1) {Human (Homo sapiens) [TaxId: 9606]}
vltegnprweqthltyrienytpdlpradvdhaiekafqlwsnvtpltftkvsegqadim
isfvrgdhrdnspfdgpggnlahafqpgpgiggdahfdederwtnnfreynlhrvaahel
ghslglshstdigalmypsytfsgdvqlaqddidgiqaiygrsqnpvqp

SCOPe Domain Coordinates for d1ayka_:

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(The format of our PDB-style files is described here.)

Timeline for d1ayka_: