Lineage for d7d6ra_ (7d6r A:)

  1. Root: SCOPe 2.08
  2. 2923792Class d: Alpha and beta proteins (a+b) [53931] (396 folds)
  3. 2999974Fold d.165: Ribosome inactivating proteins (RIP) [56370] (1 superfamily)
    contains mixed beta-sheet
  4. 2999975Superfamily d.165.1: Ribosome inactivating proteins (RIP) [56371] (3 families) (S)
  5. 3000331Family d.165.1.2: Shiga toxin, A-chain [56395] (2 proteins)
  6. 3000332Protein Shiga toxin, A-chain [56396] (5 species)
  7. 3000345Species Shigella dysenteriae, toxin II [TaxId:622] [103337] (3 PDB entries)
  8. 3000346Domain d7d6ra_: 7d6r A: [403220]
    Other proteins in same PDB: d7d6rb_, d7d6rc_, d7d6rd_, d7d6re_, d7d6rf_
    automated match to d1r4pa_
    complexed with 1ps, nh2

Details for d7d6ra_

PDB Entry: 7d6r (more details), 1.6 Å

PDB Description: crystal structure of the stx2a complexed with mma betaala peptide
PDB Compounds: (A:) rRNA N-glycosylase

SCOPe Domain Sequences for d7d6ra_:

Sequence, based on SEQRES records: (download)

>d7d6ra_ d.165.1.2 (A:) Shiga toxin, A-chain {Shigella dysenteriae, toxin II [TaxId: 622]}
reftidfstqqsyvsslnsirteistplehisqgttsvsvinhtppgsyfavdirgldvy
qarfdhlrliieqnnlyvagfvntatntfyrfsdfthisvpgvttvsmttdssyttlqrv
aalersgmqisrhslvssylalmefsgntmtrdasravlrfvtvtaealrfrqiqrefrq
alsetapvytmtpgdvdltlnwgrisnvlpeyrgedgvrvgrisfnnisailgtvaviln
chhqgarsvravneesqpecqitgdrpvikinntlwesntaaaflnrksqflyttgk

Sequence, based on observed residues (ATOM records): (download)

>d7d6ra_ d.165.1.2 (A:) Shiga toxin, A-chain {Shigella dysenteriae, toxin II [TaxId: 622]}
reftidfstqqsyvsslnsirteistplehisqgttsvsvinhtppgsyfavdirgldvy
qarfdhlrliieqnnlyvagfvntatntfyrfsdfthisvpgvttvsmttdssyttlqrv
aalersgmqisrhslvssylalmefsgntmtrdasravlrfvtvtaealrfrqiqrefrq
alsetapvytmtpgdvdltlnwgrisnvlpeyrgedgvrvgrisfnnisailgtvaviln
cqpecqitgdrpvikinntlwesntaaaflnrksqflyttgk

SCOPe Domain Coordinates for d7d6ra_:

Click to download the PDB-style file with coordinates for d7d6ra_.
(The format of our PDB-style files is described here.)

Timeline for d7d6ra_: