SCOPe 2.07: Domain d7lo4b1: 7lo4 B:333-530

Lineage for d7lo4b1 (7lo4 B:333-530)

1. Root: SCOPe 2.07

2. Class d: Alpha and beta proteins (a+b) [53931] (388 folds)

3. Fold d.318: SARS receptor-binding domain-like [143586] (1 superfamily)
   core: 3 layers, a/b/a; antiparallel beta-sheet of 5 strands, order 13542

4. Superfamily d.318.1: SARS receptor-binding domain-like [143587] (1 family)
   automatically mapped to Pfam PF09408

5. Family d.318.1.1: SARS receptor-binding domain-like [143588] (1 protein)
   part of PfamB PB000266

6. Protein Spike protein S1 [143589] (4 species)

7. Species Severe acute respiratory syndrome coronavirus 2 [TaxId:2697049] [382292] (92 PDB entries)

8. Domain d7lo4b1: 7lo4 B:333-530 [402471]
   Other proteins in same PDB: d7lo4a_, d7lo4b2
   automated match to d2dd8s1
   complexed with edo, nag, zn; mutant

Details for d7lo4b1

PDB Entry: 7lo4, 2.47 Å

PDB Description: sars-cov-2 spike receptor-binding domain with a g485r mutation in complex with human ace2

PDB Compounds: (B:) Spike protein S1

SCOPe Domain Sequences for d7lo4b1:

Sequence; same for both SEQRES and ATOM records:

>d7lo4b1 d.318.1.1 (B:333-530) Spike protein S1 {Severe acute respiratory syndrome coronavirus 2 [TaxId: 2697049]}
tnlcpfgevfnatrfasvyawnrkrisncvadysvlynsasfstfkcygvsptklndlcf
tnvyadsfvirgdevrqiapgqtgkiadynyklpddftgcviawnsnnldskvggnynyl
yrlfrksnlkpferdisteiyqagstpcngverfncyfplqsygfqptngvgyqpyrvvv
lsfellhapatvcgpkks

Timeline for d7lo4b1:

• d7lo4b1 is new in SCOPe 2.07-stable
  
• d7lo4b1 appears in the current release, SCOPe 2.08