SCOPe 2.08: Domain d7ljsd4: 7ljs D:533-844

Lineage for d7ljsd4 (7ljs D:533-844)

1. Root: SCOPe 2.08

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.1: TIM beta/alpha-barrel [51350] (34 superfamilies)
   contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
   the first seven superfamilies have similar phosphate-binding sites

4. Superfamily c.1.4: FMN-linked oxidoreductases [51395] (2 families)

5. Family c.1.4.1: FMN-linked oxidoreductases [51396] (19 proteins)

6. Protein Dihydropyrimidine dehydrogenase, domain 4 [51410] (1 species)

7. Species Pig (Sus scrofa) [TaxId:9823] [51411] (9 PDB entries)

8. Domain d7ljsd4: 7ljs D:533-844 [402181]
   Other proteins in same PDB: d7ljsa1, d7ljsa2, d7ljsa3, d7ljsa5, d7ljsb1, d7ljsb2, d7ljsb3, d7ljsb5, d7ljsc1, d7ljsc2, d7ljsc3, d7ljsc5, d7ljsd1, d7ljsd2, d7ljsd3, d7ljsd5
   automated match to d1gted2
   complexed with fad, fmn, sf4, y3g
   has additional subdomain(s) that are not in the common domain
   has additional insertions and/or extensions that are not grouped together

Details for d7ljsd4

PDB Entry: 7ljs, 2 Å

PDB Description: porcine dihydropyrimidine dehydrogenase (dpd) complexed with 5- ethynyluracil (5eu) - open form

PDB Compounds: (D:) Dihydropyrimidine dehydrogenase [NADP(+)]

SCOPe Domain Sequences for d7ljsd4:

Sequence; same for both SEQRES and ATOM records:

>d7ljsd4 c.1.4.1 (D:533-844) Dihydropyrimidine dehydrogenase, domain 4 {Pig (Sus scrofa) [TaxId: 9823]}
isvemaglkfinpfglasaapttsssmirrafeagwgfaltktfsldkdivtnvsprivr
gttsgpmygpgqssflnielisektaaywcqsvtelkadfpdniviasimcsynkndwme
lsrkaeasgadalelnlscphgmgergmglacgqdpelvrnicrwvrqavqipffakltp
nvtdivsiaraakeggadgvtatntvsglmglkadgtpwpavgagkrttyggvsgtairp
ialravttiaralpgfpilatggidsaesglqflhsgasvlqvcsavqnqdftviqdyct
glkallylksie

Timeline for d7ljsd4:

• d7ljsd4 first appeared in SCOPe 2.07