SCOPe 2.08: Domain d6ywzb1: 6ywz B:654-759

Lineage for d6ywzb1 (6ywz B:654-759)

1. Root: SCOPe 2.08

2. Class b: All beta proteins [48724] (180 folds)

3. Fold b.36: PDZ domain-like [50155] (1 superfamily)
   contains barrel, partly opened; n*=4, S*=8; meander; capped by alpha-helix

4. Superfamily b.36.1: PDZ domain-like [50156] (7 families)
   peptide-binding domain

5. Family b.36.1.1: PDZ domain [50157] (47 proteins)
   Pfam PF00595

6. Protein Shank1, PDZ domain [101733] (2 species)
   SH3 and multiple ankyrin repeat domains protein 1

7. Species Human (Homo sapiens) [TaxId:9606] [401374] (2 PDB entries)

8. Domain d6ywzb1: 6ywz B:654-759 [401375]
   Other proteins in same PDB: d6ywza2, d6ywzb2
   automated match to d1q3ob_
   complexed with arg, leu, peg, pwn, thr

Details for d6ywzb1

PDB Entry: 6ywz, 2.12 Å

PDB Description: crystal structure of shank1 pdz in complex with a peptide-small molecule hybrid

PDB Compounds: (B:) SH3 and multiple ankyrin repeat domains protein 1

SCOPe Domain Sequences for d6ywzb1:

Sequence; same for both SEQRES and ATOM records:

>d6ywzb1 b.36.1.1 (B:654-759) Shank1, PDZ domain {Human (Homo sapiens) [TaxId: 9606]}
gsdyiikektvllqkkdsegfgfvlrgakaqtpieeftptpafpalqylesvdeggvawr
aglrmgdflievngqnvvkvghrqvvnmirqggntlmvkvvmvtrh

Timeline for d6ywzb1:

• d6ywzb1 first appeared in SCOPe 2.07