SCOPe 2.08: Domain d6vlla1: 6vll A:1-194

Lineage for d6vlla1 (6vll A:1-194)

1. Root: SCOPe 2.08

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.52: Restriction endonuclease-like [52979] (4 superfamilies)
   core: 3 layers, a/b/a; mixed beta-sheet of 5 strands, order 12345; strands 2 &, in some families, 5 are antiparallel to the rest

4. Superfamily c.52.1: Restriction endonuclease-like [52980] (37 families)

5. Family c.52.1.34: PA N-terminal domain [254166] (3 proteins)
   Pfam PF00603; relationship to endonucleases discussed in PubMed 19194458

6. Protein PA N-terminal domain [254375] (8 species)

7. Species Influenza A virus [TaxId:93838] [254808] (91 PDB entries)

8. Domain d6vlla1: 6vll A:1-194 [400648]
   Other proteins in same PDB: d6vlla2
   automated match to d4e5ed_
   complexed with mn, r3j, so4; mutant

Details for d6vlla1

PDB Entry: 6vll, 2.87 Å

PDB Description: the crystal structure of the 2009/h1n1/california pa endonuclease mutant i38t in complex with sj000986213

PDB Compounds: (A:) Polymerase acidic protein

SCOPe Domain Sequences for d6vlla1:

Sequence; same for both SEQRES and ATOM records:

>d6vlla1 c.52.1.34 (A:1-194) PA N-terminal domain {Influenza A virus [TaxId: 93838]}
medfvrqcfnpmivelaekamkeygedpkietnkfaatcthlevcfmysdggskhrfeii
egrdrimawtvvnsicnttgvekpkflpdlydykenrfieigvtrrevhiyylekankik
sekthihifsftgeematkadytldeesrariktrlftirqemasrslwdsfrqs

Timeline for d6vlla1:

• d6vlla1 first appeared in SCOPe 2.07