SCOPe 2.08: Domain d6lzua_: 6lzu A:

Lineage for d6lzua_ (6lzu A:)

1. Root: SCOPe 2.08

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.94: Periplasmic binding protein-like II [53849] (1 superfamily)
   consists of two similar intertwined domain with 3 layers (a/b/a) each: duplication
   mixed beta-sheet of 5 strands, order 21354; strand 5 is antiparallel to the rest

4. Superfamily c.94.1: Periplasmic binding protein-like II [53850] (4 families)
   Similar in architecture to the superfamily I but partly differs in topology

5. Family c.94.1.0: automated matches [191309] (1 protein)
   not a true family

6. Protein automated matches [190039] (161 species)
   not a true protein

7. Species Vibrio harveyi [TaxId:673519] [348941] (10 PDB entries)

8. Domain d6lzua_: 6lzu A: [400074]
   automated match to d4pfua_
   complexed with ca, cl, edo, mg, nag; mutant

Details for d6lzua_

PDB Entry: 6lzu, 1.9 Å

PDB Description: f411a mutant of chitin-specific solute binding protein from vibrio harveyi co-crystalized with chitobiose.

PDB Compounds: (A:) Peptide ABC transporter, periplasmic peptide-binding protein

SCOPe Domain Sequences for d6lzua_:

Sequence, based on SEQRES records:

>d6lzua_ c.94.1.0 (A:) automated matches {Vibrio harveyi [TaxId: 673519]}
rseltihpkefttfvrnfnpflgatnlhtttdfiyeplvvfnemhgntpvfrlaenfqms
ddlmsvtfdirkgvkwsdgeaftaddvvysfnlvkekpeldqsginswvtgvekvndyqv
kfrlseansnvpyeiakvpvvpkhvwskvkdpstftnenpvgsgpftvidtftpqlyiqc
enpnywdaanldvdclrvpqianndqflgkvvngemdwtssfvpdidrtyaaaspkhhyw
yppagtqafvvnfknpdaaknealtnvdfrrafsmaldrqtiidiafygggtvndfasgl
gyafeawsdekthdkfkaynsynaegakkllakagfkdvnkdgfvdtpsgksfelliqsp
ngwtdfnntvqlaveqlaevgikarartpdfsvynqamlegtydvaytnyahgadpytyw
nsaynsalqsgdgmprfamhfyknekldgllnsfyktadkqeqleiahgiqqiiaqdqvt
ipvlsgaymyqynttrftgwwneenpkgrpniwagiperllhvldlkpv

Sequence, based on observed residues (ATOM records):

>d6lzua_ c.94.1.0 (A:) automated matches {Vibrio harveyi [TaxId: 673519]}
rseltihpkefttfvrnfnpflgatnlhtttdfiyeplvvfnemhgntpvfrlaenfqms
dmsvtfdirkgvkwsdgeaftaddvvysfnlvkekpeldqsginswvtgvekvndyqvkf
rlseansnvpyeiakvpvvpkhvwskvkdpstftnenpvgsgpftvidtftpqlyiqcen
pnywdaanldvdclrvpqianndqflgkvvngemdwtssfvpdidrtyaaaspkhhywyp
pagtqafvvnfknpdaaknealtnvdfrrafsmaldrqtiidiafygggtvndfasglgy
afeawsdekthdkfkaynsynaegakkllakagfkdvnkdgfvdtpsgksfelliqspng
wtdfnntvqlaveqlaevgikarartpdfsvynqamlegtydvaytnyahgadpytywns
aynsalqsgdgmprfamhfyknekldgllnsfyktadkqeqleiahgiqqiiaqdqvtip
vlsgaymyqynttrftgwwneenpkgrpniwagiperllhvldlkpv

Timeline for d6lzua_:

• d6lzua_ first appeared in SCOPe 2.07