SCOPe 2.07: Species: Janthinobacterium sp. [TaxId: 213804]

Lineage for Species: Janthinobacterium sp. [TaxId: 213804]

Root: SCOPe 2.07
Class d: Alpha and beta proteins (a+b) [53931] (388 folds)
Fold d.129: TBP-like [55944] (11 superfamilies)
beta-alpha-beta(4)-alpha

Superfamily d.129.3: Bet v1-like [55961] (11 families)

(S)

contains a single copy of this fold with a alpha-beta2 insertion after the first helix; there is a cavity between the beta-sheet and the long C-terminal helix

Family d.129.3.3: Ring hydroxylating alpha subunit catalytic domain [55969] (7 proteins)
Pfam PF00848; contains a few insertion and C-terminal extension compared with Bet v1
Protein automated matches [319939] (2 species)
not a true protein
Species Janthinobacterium sp. [TaxId:213804] [399623] (9 PDB entries)

PDB entries in Species: Janthinobacterium sp. [TaxId: 213804]:

Domain(s) for 6ll0:
1. Domain d6ll0a2: 6ll0 A:143-384 [399624]
  Other proteins in same PDB: d6ll0a1, d6ll0b1, d6ll0c1
  automated match to d2de6a2
  complexed with 9ca, edo, fe2, fes, mg, peg, pge
2. Domain d6ll0b2: 6ll0 B:143-384 [399664]
  Other proteins in same PDB: d6ll0a1, d6ll0b1, d6ll0c1
  automated match to d2de6a2
  complexed with 9ca, edo, fe2, fes, mg, peg, pge
3. Domain d6ll0c2: 6ll0 C:143-384 [399643]
  Other proteins in same PDB: d6ll0a1, d6ll0b1, d6ll0c1
  automated match to d2de6a2
  complexed with 9ca, edo, fe2, fes, mg, peg, pge
Domain(s) for 6ll1:
1. Domain d6ll1a2: 6ll1 A:143-384 [399721]
  Other proteins in same PDB: d6ll1a1, d6ll1b1, d6ll1c1
  automated match to d2de6a2
  complexed with dms, edo, fe2, fes, mg, oxy, peg, pge
2. Domain d6ll1b2: 6ll1 B:143-384 [399856]
  Other proteins in same PDB: d6ll1a1, d6ll1b1, d6ll1c1
  automated match to d2de6a2
  complexed with dms, edo, fe2, fes, mg, oxy, peg, pge
3. Domain d6ll1c2: 6ll1 C:143-384 [399830]
  Other proteins in same PDB: d6ll1a1, d6ll1b1, d6ll1c1
  automated match to d2de6a2
  complexed with dms, edo, fe2, fes, mg, oxy, peg, pge
Domain(s) for 6ll4:
1. Domain d6ll4a2: 6ll4 A:143-384 [399695]
  Other proteins in same PDB: d6ll4a1, d6ll4b1, d6ll4c1
  automated match to d2de6a2
  complexed with 9g0, dms, edo, ehx, fe, fes, mg, peg, pge
2. Domain d6ll4b2: 6ll4 B:143-384 [399645]
  Other proteins in same PDB: d6ll4a1, d6ll4b1, d6ll4c1
  automated match to d2de6a2
  complexed with 9g0, dms, edo, ehx, fe, fes, mg, peg, pge
3. Domain d6ll4c2: 6ll4 C:143-384 [399748]
  Other proteins in same PDB: d6ll4a1, d6ll4b1, d6ll4c1
  automated match to d2de6a2
  complexed with 9g0, dms, edo, ehx, fe, fes, mg, peg, pge
Domain(s) for 6llf:
1. Domain d6llfa2: 6llf A:143-384 [399834]
  Other proteins in same PDB: d6llfa1, d6llfa3, d6llfb1, d6llfb3, d6llfc1, d6llfc3
  automated match to d2de6a2
  complexed with edo, fe2, fes, gol, peg, pge, wbp
2. Domain d6llfb2: 6llf B:143-384 [399738]
  Other proteins in same PDB: d6llfa1, d6llfa3, d6llfb1, d6llfb3, d6llfc1, d6llfc3
  automated match to d2de6a2
  complexed with edo, fe2, fes, gol, peg, pge, wbp
3. Domain d6llfc2: 6llf C:143-384 [399725]
  Other proteins in same PDB: d6llfa1, d6llfa3, d6llfb1, d6llfb3, d6llfc1, d6llfc3
  automated match to d2de6a2
  complexed with edo, fe2, fes, gol, peg, pge, wbp
Domain(s) for 6llh:
1. Domain d6llha2: 6llh A:143-384 [399691]
  Other proteins in same PDB: d6llha1, d6llha3, d6llhb1, d6llhb3, d6llhc1, d6llhc3
  automated match to d2de6a2
  complexed with act, bpy, edo, fe2, fes, gol, peg, pge
2. Domain d6llhb2: 6llh B:143-384 [399711]
  Other proteins in same PDB: d6llha1, d6llha3, d6llhb1, d6llhb3, d6llhc1, d6llhc3
  automated match to d2de6a2
  complexed with act, bpy, edo, fe2, fes, gol, peg, pge
3. Domain d6llhc2: 6llh C:143-384 [399754]
  Other proteins in same PDB: d6llha1, d6llha3, d6llhb1, d6llhb3, d6llhc1, d6llhc3
  automated match to d2de6a2
  complexed with act, bpy, edo, fe2, fes, gol, peg, pge
Domain(s) for 6llk:
- Domain d6llka2: 6llk A:143-384 [399750]
  Other proteins in same PDB: d6llka1, d6llka3
  automated match to d2de6a2
  complexed with dms, fe2, fes, mpd, wbp
Domain(s) for 6llm:
- Domain d6llma2: 6llm A:143-384 [399730]
  Other proteins in same PDB: d6llma1, d6llma3
  automated match to d2de6a2
  complexed with bpy, dms, fe2, fes, trs
Domain(s) for 7bug:
1. Domain d7buga2: 7bug A:143-384 [401861]
  Other proteins in same PDB: d7buga1, d7bugb1, d7bugc1
  automated match to d2de6a2
  complexed with 1pe, co3, fe2, fes, mg, mxe, p6g, peg, pg0, pg4, pge
2. Domain d7bugb2: 7bug B:143-384 [401830]
  Other proteins in same PDB: d7buga1, d7bugb1, d7bugc1
  automated match to d2de6a2
  complexed with 1pe, co3, fe2, fes, mg, mxe, p6g, peg, pg0, pg4, pge
3. Domain d7bugc2: 7bug C:143-384 [401767]
  Other proteins in same PDB: d7buga1, d7bugb1, d7bugc1
  automated match to d2de6a2
  complexed with 1pe, co3, fe2, fes, mg, mxe, p6g, peg, pg0, pg4, pge
Domain(s) for 7bui:
1. Domain d7buia2: 7bui A:143-384 [401788]
  Other proteins in same PDB: d7buia1, d7buia3, d7buib1, d7buib3, d7buic1, d7buic3
  automated match to d2de6a2
  complexed with edo, fe2, fes, peg
2. Domain d7buib2: 7bui B:143-384 [401888]
  Other proteins in same PDB: d7buia1, d7buia3, d7buib1, d7buib3, d7buic1, d7buic3
  automated match to d2de6a2
  complexed with edo, fe2, fes, peg
3. Domain d7buic2: 7bui C:143-384 [401754]
  Other proteins in same PDB: d7buia1, d7buia3, d7buib1, d7buib3, d7buic1, d7buic3
  automated match to d2de6a2
  complexed with edo, fe2, fes, peg

More info for Species Janthinobacterium sp. [TaxId:213804] from d.129.3.3 automated matches

Timeline for Species Janthinobacterium sp. [TaxId:213804] from d.129.3.3 automated matches:

Species Janthinobacterium sp. [TaxId:213804] from d.129.3.3 automated matches is new in SCOPe 2.07-stable
Species Janthinobacterium sp. [TaxId:213804] from d.129.3.3 automated matches appears in the current release, SCOPe 2.08