SCOP 1.63: Domain d1gpdr2: 1gpd R:149-312

Lineage for d1gpdr2 (1gpd R:149-312)

1. Root: SCOP 1.63

2. Class d: Alpha and beta proteins (a+b) [53931] (224 folds)

3. Fold d.81: Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain [55346] (1 superfamily)
   core: alpha-beta-alpha-beta(3); mixed sheet: 2134, strand 2 is parallel to strand 1

4. Superfamily d.81.1: Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain [55347] (5 families)
   N-terminal domain is the classic Rossmann-fold

5. Family d.81.1.1: GAPDH-like [55348] (2 proteins)
   has many additional secondary structures

6. Protein Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) [55349] (13 species)

7. Species Lobster (Homarus americanus) [55358] (2 PDB entries)

8. Domain d1gpdr2: 1gpd R:149-312 [39936]
   Other proteins in same PDB: d1gpdg1, d1gpdr1
   complexed with ips, nad, sps

Details for d1gpdr2

PDB Entry: 1gpd, 2.9 Å

PDB Description: studies of asymmetry in the three-dimensional structure of lobster d-glyceraldehyde-3-phosphate dehydrogenase

SCOP Domain Sequences for d1gpdr2:

Sequence; same for both SEQRES and ATOM records:

>d1gpdr2 d.81.1.1 (R:149-312) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Lobster (Homarus americanus)}
cttnclapvakvlhenfeiveglmttvhavtatqktvdgpsakdwrggrgaaqniipsst
gaakavgkvipeldgkltgmafrvptpdvsvvdltvrlgkecsyddikaamktasegplq
gflgyteddvvssdfigdnrssifdakagiqlsktfvkvvswyd

Timeline for d1gpdr2:

• d1gpdr2 first appeared (with stable ids) in SCOP 1.55
  
• d1gpdr2 appears in SCOP 1.61
  
• d1gpdr2 appears in SCOP 1.65
  
• d1gpdr2 appears in the current release, SCOPe 2.08