SCOPe 2.06: Domain d2dbvo2: 2dbv O:149-312

Lineage for d2dbvo2 (2dbv O:149-312)

1. Root: SCOPe 2.06

2. Class d: Alpha and beta proteins (a+b) [53931] (385 folds)

3. Fold d.81: FwdE/GAPDH domain-like [55346] (4 superfamilies)
   core: alpha-beta-alpha-beta(3); mixed sheet: 2134, strand 2 is parallel to strand 1

4. Superfamily d.81.1: Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain [55347] (5 families)
   N-terminal domain is the classic Rossmann-fold

5. Family d.81.1.1: GAPDH-like [55348] (6 proteins)
   has many additional secondary structures

6. Protein Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) [55349] (20 species)

7. Species Bacillus stearothermophilus, nca 1503 [TaxId:1422] [55351] (11 PDB entries)

8. Domain d2dbvo2: 2dbv O:149-312 [39885]
   Other proteins in same PDB: d2dbvo1, d2dbvp1, d2dbvq1, d2dbvr1
   complexed with ndp, so4; mutant

Details for d2dbvo2

PDB Entry: 2dbv, 2.2 Å

PDB Description: glyceraldehyde-3-phosphate dehydrogenase mutant with asp 32 replaced by gly, leu 187 replaced by ala, and pro 188 replaced by ser complexed with nadp+

PDB Compounds: (O:) glyceraldehyde-3-phosphate dehydrogenase

SCOPe Domain Sequences for d2dbvo2:

Sequence; same for both SEQRES and ATOM records:

>d2dbvo2 d.81.1.1 (O:149-312) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Bacillus stearothermophilus, nca 1503 [TaxId: 1422]}
cttnclapfakvlheqfgivrgmmttvhsytndqrildashkdlrraraaaesiiptttg
aakavalvlpelkgklngmamrvptpnvsvvdlvaelekevtveevnaalkaaaegelkg
ilayseeplvsrdyngstvsstidalstmvidgkmvkvvswyd

Timeline for d2dbvo2:

• d2dbvo2 first appeared (with stable ids) in SCOP 1.55
  
• d2dbvo2 appears in SCOPe 2.05
  
• d2dbvo2 appears in SCOPe 2.07
  
• d2dbvo2 appears in the current release, SCOPe 2.08