SCOPe 2.08: Domain d6yccb_: 6ycc B:

Lineage for d6yccb_ (6ycc B:)

1. Root: SCOPe 2.08

2. Class d: Alpha and beta proteins (a+b) [53931] (396 folds)

3. Fold d.3: Cysteine proteinases [54000] (1 superfamily)
   consists of one alpha-helix and 4 strands of antiparallel beta-sheet and contains the catalytic triad Cys-His-Asn

4. Superfamily d.3.1: Cysteine proteinases [54001] (24 families)
   the constitute families differ by insertion into and circular permutation of the common catalytic core made of one alpha-helix and 3-strands of beta-sheet

5. Family d.3.1.0: automated matches [191342] (1 protein)
   not a true family

6. Protein automated matches [190230] (23 species)
   not a true protein

7. Species Pineapple (Ananas comosus) [TaxId:4615] [358316] (10 PDB entries)

8. Domain d6yccb_: 6ycc B: [396466]
   automated match to d1iwda_
   complexed with e64, gol, so4

Details for d6yccb_

PDB Entry: 6ycc, 1.3 Å

PDB Description: structure the ananain protease from ananas comosus covalently bound to the e64 inhibitor

PDB Compounds: (B:) Ananain

SCOPe Domain Sequences for d6yccb_:

Sequence; same for both SEQRES and ATOM records:

>d6yccb_ d.3.1.0 (B:) automated matches {Pineapple (Ananas comosus) [TaxId: 4615]}
vpqsidwrdsgavtsvknqgrcgscwafasiatvesiykikrgnlvslseqqvldcavsy
gckggwinkaysfiisnkgvasaaiypykaakgtcktngvpnsayitrytyvqrnnernm
myavsnqpiaaaldasgnfqhykrgvftgpcgtrlnhaiviigygqdssgkkfwivrnsw
gagwgeggyirlardvsssfglcgiamdplyptlq

Timeline for d6yccb_:

• d6yccb_ first appeared in SCOPe 2.07