Lineage for d6thd1_ (6thd 1:)

  1. Root: SCOPe 2.07
  2. 2352458Class b: All beta proteins [48724] (178 folds)
  3. 2430785Fold b.121: Nucleoplasmin-like/VP (viral coat and capsid proteins) [88632] (7 superfamilies)
    sandwich; 8 strands in 2 sheets; jelly-roll; some members can have additional 1-2 strands
    characteristic interaction between the domains of this fold allows the formation of five-fold and pseudo six-fold assemblies
  4. 2431062Superfamily b.121.4: Positive stranded ssRNA viruses [88633] (10 families) (S)
  5. 2431815Family b.121.4.0: automated matches [191569] (1 protein)
    not a true family
  6. 2431816Protein automated matches [190988] (22 species)
    not a true protein
  7. 2431819Species Bovine enterovirus (strain vg-5-27) [TaxId:12065] [395796] (2 PDB entries)
  8. 2431820Domain d6thd1_: 6thd 1: [395870]
    Other proteins in same PDB: d6thd3_
    automated match to d5c4wa_
    complexed with myr, so4

Details for d6thd1_

PDB Entry: 6thd (more details), 2.23 Å

PDB Description: multiple genomic rna-coat protein contacts play vital roles in the assembly of infectious enterovirus-e
PDB Compounds: (1:) Genome polyprotein

SCOPe Domain Sequences for d6thd1_:

Sequence; same for both SEQRES and ATOM records: (download)

>d6thd1_ b.121.4.0 (1:) automated matches {Bovine enterovirus (strain vg-5-27) [TaxId: 12065]}
gkmlkdaidkqvagalvagtttsthsvatdstpalqaaetgatstardesmietrtivpt
hgihetsvesffgrsslvgmpllatgtsithwridfrefvqlrakmswftymrfdvefti
iatsstgqnvtteqhttyqvmyvppgapvpsnqdsfqwqsgcnpsvfadtdgppaqfsvp
fmssanaystvydgyarfmdtdpdrygilpsnflgfmyfrtledaahqvrfriyakikht
scwipraprqapykkrynlvfsgdsdricsnrasltsy

SCOPe Domain Coordinates for d6thd1_:

Click to download the PDB-style file with coordinates for d6thd1_.
(The format of our PDB-style files is described here.)

Timeline for d6thd1_: