SCOPe 2.08: Domain d1qmid2: 1qmi D:5-184,D:280-339

Lineage for d1qmid2 (1qmi D:5-184,D:280-339)

1. Root: SCOPe 2.08

2. Class d: Alpha and beta proteins (a+b) [53931] (396 folds)

3. Fold d.68: IF3-like [55199] (8 superfamilies)
   beta-alpha-beta-alpha-beta(2); 2 layers; mixed sheet 1243, strand 4 is antiparallel to the rest

4. Superfamily d.68.2: EPT/RTPC-like [55205] (3 families)

5. Family d.68.2.1: RNA 3'-terminal phosphate cyclase, RPTC [55206] (1 protein)
   duplication: 3 repeats of this fold are packed together around the pseudo threefold axis

6. Protein RNA 3'-terminal phosphate cyclase, RPTC [55207] (1 species)
   also contains an insert alpha+beta domain of the thioredoxin-like topology

7. Species Escherichia coli [TaxId:562] [55208] (2 PDB entries)

8. Domain d1qmid2: 1qmi D:5-184,D:280-339 [39573]
   Other proteins in same PDB: d1qmia1, d1qmib1, d1qmic1, d1qmid1

Details for d1qmid2

PDB Entry: 1qmi, 2.8 Å

PDB Description: Crystal structure of RNA 3'-terminal phosphate cyclase, an ubiquitous enzyme with unusual topology

PDB Compounds: (D:) RNA 3'-terminal phosphate cyclase

SCOPe Domain Sequences for d1qmid2:

Sequence; same for both SEQRES and ATOM records:

>d1qmid2 d.68.2.1 (D:5-184,D:280-339) RNA 3'-terminal phosphate cyclase, RPTC {Escherichia coli [TaxId: 562]}
mialdgaqgegggqilrsalslsmitgqpftitsiragrakpgllrqhltavkaateicg
atvegaelgsqrllfrpgtvrggdyrfaigsagsctlvlqtvlpalwfadgpsrvevsgg
tdnpsappadfirrvlepllakigihqqttllrhgfypagggvvatevspvasfntlqlg
Xavgeyladqlvlpmalagageftvahpschlltniavverflpvrfslietdgvtrvsi
e

Timeline for d1qmid2:

• d1qmid2 first appeared (with stable ids) in SCOP 1.55
  
• d1qmid2 appears in SCOPe 2.07