SCOPe 2.08: Domain d6kb6a1: 6kb6 A:200-468

Lineage for d6kb6a1 (6kb6 A:200-468)

1. Root: SCOPe 2.08

2. Class a: All alpha proteins [46456] (290 folds)

3. Fold a.123: Nuclear receptor ligand-binding domain [48507] (1 superfamily)
   multihelical; 3 layers or orthogonally packed helices

4. Superfamily a.123.1: Nuclear receptor ligand-binding domain [48508] (2 families)

5. Family a.123.1.1: Nuclear receptor ligand-binding domain [48509] (34 proteins)

6. Protein Peroxisome proliferator activated receptor alpha, PPAR-alpha [69109] (1 species)

7. Species Human (Homo sapiens) [TaxId:9606] [69110] (30 PDB entries)

8. Domain d6kb6a1: 6kb6 A:200-468 [394716]
   Other proteins in same PDB: d6kb6a2
   automated match to d3kdua_
   complexed with gol, t4t

Details for d6kb6a1

PDB Entry: 6kb6, 1.43 Å

PDB Description: x-ray structure of human pparalpha ligand binding domain- tetradecylthioacetic acid (tta) co-crystals obtained by delipidation and cross-seeding

PDB Compounds: (A:) Peroxisome proliferator-activated receptor alpha

SCOPe Domain Sequences for d6kb6a1:

Sequence, based on SEQRES records:

>d6kb6a1 a.123.1.1 (A:200-468) Peroxisome proliferator activated receptor alpha, PPAR-alpha {Human (Homo sapiens) [TaxId: 9606]}
tadlkslakriyeaylknfnmnkvkarvilsgkasnnppfvihdmetlcmaektlvaklv
angiqnkeaevrifhccqctsvetvteltefakaipgfanldlndqvtllkygvyeaifa
mlssvmnkdgmlvaygngfitreflkslrkpfcdimepkfdfamkfnalelddsdislfv
aaiiccgdrpgllnvghiekmqegivhvlrlhlqsnhpddiflfpkllqkmadlrqlvte
haqlvqiikktesdaalhpllqeiyrdmy

Sequence, based on observed residues (ATOM records):

>d6kb6a1 a.123.1.1 (A:200-468) Peroxisome proliferator activated receptor alpha, PPAR-alpha {Human (Homo sapiens) [TaxId: 9606]}
tadlkslakriyeaylknfnmnkvkarvilsgsnnppfvihdmetlcmaektlvaklvan
giqnkeaevrifhccqctsvetvteltefakaipgfanldlndqvtllkygvyeaifaml
ssvmnkdgmlvaygngfitreflkslrkpfcdimepkfdfamkfnalelddsdislfvaa
iiccgdrpgllnvghiekmqegivhvlrlhlqsnhpddiflfpkllqkmadlrqlvteha
qlvqiikktesdaalhpllqeiyrdmy

Timeline for d6kb6a1:

• d6kb6a1 first appeared in SCOPe 2.07