Lineage for d6v7zc1 (6v7z C:6-183)

  1. Root: SCOPe 2.07
  2. 2494617Class d: Alpha and beta proteins (a+b) [53931] (388 folds)
  3. 2506503Fold d.19: MHC antigen-recognition domain [54451] (1 superfamily)
    dimeric
  4. 2506504Superfamily d.19.1: MHC antigen-recognition domain [54452] (2 families) (S)
  5. 2506505Family d.19.1.1: MHC antigen-recognition domain [54453] (13 proteins)
  6. 2506506Protein CD1, alpha-1 and alpha-2 domains [54456] (5 species)
    Class I MHC-related
  7. 2506511Species Human (Homo sapiens), CD1a [TaxId:9606] [102838] (15 PDB entries)
  8. 3092500Domain d6v7zc1: 6v7z C:6-183 [392562]
    Other proteins in same PDB: d6v7za2, d6v7zb1, d6v7zb2, d6v7zc2, d6v7zd_, d6v7ze_, d6v7zf_
    automated match to d1zt4c2
    complexed with agh, bgc, cl, na, nag, peg, so4

Details for d6v7zc1

PDB Entry: 6v7z (more details), 2.75 Å

PDB Description: human cd1d presenting alpha-galactosylceramide in complex with vhh nanobody 1d22
PDB Compounds: (C:) Antigen-presenting glycoprotein CD1d

SCOPe Domain Sequences for d6v7zc1:

Sequence, based on SEQRES records: (download)

>d6v7zc1 d.19.1.1 (C:6-183) CD1, alpha-1 and alpha-2 domains {Human (Homo sapiens), CD1a [TaxId: 9606]}
rlfplrclqissfansswtrtdglawlgelqthswsndsdtvrslkpwsqgtfsdqqwet
lqhifrvyrssftrdvkefakmlrlsyplelqvsagcevhpgnasnnffhvafqgkdils
fqgtsweptqeaplwvnlaiqvlnqdkwtretvqwllngtcpqfvsgllesgkselkk

Sequence, based on observed residues (ATOM records): (download)

>d6v7zc1 d.19.1.1 (C:6-183) CD1, alpha-1 and alpha-2 domains {Human (Homo sapiens), CD1a [TaxId: 9606]}
rlfplrclqissfansswtrtdglawlgelqthswsndsdtvrslkpwsqgtfsdqqwet
lqhifrvyrssftrdvkefakmlrlsyplelqvsagcevhpgasnnffhvafqgkdilsf
qgtsweptqeaplwvnlaiqvlnqdkwtretvqwllngtcpqfvsgllesgkselkk

SCOPe Domain Coordinates for d6v7zc1:

Click to download the PDB-style file with coordinates for d6v7zc1.
(The format of our PDB-style files is described here.)

Timeline for d6v7zc1:

  • d6v7zc1 is new in SCOPe 2.07-stable