SCOPe 2.08: Domain d6urib_: 6uri B:

Lineage for d6urib_ (6uri B:)

1. Root: SCOPe 2.08

2. Class a: All alpha proteins [46456] (290 folds)

3. Fold a.118: alpha-alpha superhelix [48370] (28 superfamilies)
   multihelical; 2 (curved) layers: alpha/alpha; right-handed superhelix

4. Superfamily a.118.1: ARM repeat [48371] (28 families)

5. Family a.118.1.10: Clathrin adaptor core protein [74771] (3 proteins)
   automatically mapped to Pfam PF01602

6. Protein automated matches [190425] (2 species)
   not a true protein

7. Species Human (Homo sapiens) [TaxId:9606] [187313] (5 PDB entries)

8. Domain d6urib_: 6uri B: [392389]
   Other proteins in same PDB: d6uria_, d6urim_, d6uris_
   automated match to d1gw5b_

Details for d6urib_

PDB Entry: 6uri, 3 Å

PDB Description: hiv-1 nef in complex with the cd4 cytoplasmic domain and the ap2 clathrin adaptor complex

PDB Compounds: (B:) ap-2 complex subunit beta

SCOPe Domain Sequences for d6urib_:

Sequence, based on SEQRES records:

>d6urib_ a.118.1.10 (B:) automated matches {Human (Homo sapiens) [TaxId: 9606]}
geiselkaelnnekkekrkeavkkviaamtvgkdvsslfpdvvncmqtdnlelkklvyly
lmnyaksqpdmaimavnsfvkdcedpnpliralavrtmgcirvdkiteylceplrkclkd
edpyvrktaavcvaklhdinaqmvedqgfldslrdliadsnpmvvanavaalseiseshp
nsnlldlnpqninklltalnectewgqifildclsnynpkddreaqsicervtprlshan
savvlsavkvlmkflellpkdsdyynmllkklapplvtllsgepevqyvalrninlivqk
rpeilkqeikvffvkyndpiyvklekldimirlasqaniaqvlaelkeyatevdvdfvrk
avraigrcaikveqsaercvstlldliqtkvnyvvqeaivvirdifrkhpnkyesiiatl
cgnldsldepdaraamiwivgeyaeridnadellesflegfhdestqvqltlltaivklf
lkkpsetqelvqqvlslatqdsdnpdlrdrgyiywrllstdpvtakevvlsekpliseet
dlieptlldelichigslasvyhkppnafv

Sequence, based on observed residues (ATOM records):

>d6urib_ a.118.1.10 (B:) automated matches {Human (Homo sapiens) [TaxId: 9606]}
geiselkaelnnensfvkdcedpnpliralavrtmgcirvdkieplrkclkdedpyvrkt
aavcvaklhdinaqrdliadsnpmvvanavaalseisnpqninklltalnectewgqifi
ldclsnynpkddreaqsicervtprlshansavvlsavkvlmkflellpkdsdyynmllk
klapplvtllsgepevqyvalrninlivqkrpeilkqeikvffvkyndpiyvklekldim
irlasqaniaqvlaelkeyatevdvdfvrkavraigrcaikveqsaercvstlldliqtk
vnyvvqeaivvirdifrkhpnkyesiiatlcgnldsldepdaraamiwivgeyaeridna
dellesflegfhdestqvqltlltaivklflkkpsetqelvqqvlslatqdsdnpdlrdr
gyiywrllstdpvtakevvlsekpliseetdlieptlldelichigslasvyhkppnafv

Timeline for d6urib_:

• d6urib_ first appeared in SCOPe 2.07