Lineage for d1by9a_ (1by9 A:)

  1. Root: SCOPe 2.06
  2. 2152203Class d: Alpha and beta proteins (a+b) [53931] (385 folds)
  3. 2172288Fold d.58: Ferredoxin-like [54861] (59 superfamilies)
    alpha+beta sandwich with antiparallel beta-sheet; (beta-alpha-beta)x2
  4. 2175215Superfamily d.58.8: Viral DNA-binding domain [54957] (1 family) (S)
  5. 2175216Family d.58.8.1: Viral DNA-binding domain [54958] (2 protein domains)
  6. 2175223Protein Papillomavirus-1 E2 protein [54959] (5 species)
    forms dimers with subunit beta-sheets making (8,12) barrel
  7. 2175231Species Human papillomavirus type 16 [TaxId:333760] [54962] (5 PDB entries)
    Uniprot P03120 286-365
  8. 2175233Domain d1by9a_: 1by9 A: [39223]

Details for d1by9a_

PDB Entry: 1by9 (more details), 2.2 Å

PDB Description: crystal structure of the e2 dna-binding domain from human papillomavirus type-16: implications for its dna binding-site selection mechanism
PDB Compounds: (A:) Regulatory protein E2

SCOPe Domain Sequences for d1by9a_:

Sequence, based on SEQRES records: (download)

>d1by9a_ d.58.8.1 (A:) Papillomavirus-1 E2 protein {Human papillomavirus type 16 [TaxId: 333760]}

Sequence, based on observed residues (ATOM records): (download)

>d1by9a_ d.58.8.1 (A:) Papillomavirus-1 E2 protein {Human papillomavirus type 16 [TaxId: 333760]}

SCOPe Domain Coordinates for d1by9a_:

Click to download the PDB-style file with coordinates for d1by9a_.
(The format of our PDB-style files is described here.)

Timeline for d1by9a_: