SCOPe 2.07: Domain d6txoc_: 6txo C:

Lineage for d6txoc_ (6txo C:)

1. Root: SCOPe 2.07

2. Class b: All beta proteins [48724] (178 folds)

3. Fold b.19: Viral protein domain [49817] (1 superfamily)
   sandwich; 9 strands in 2 sheets; jelly-roll; form trimers

4. Superfamily b.19.1: Viral protein domain [49818] (4 families)
   forms homotrimers

5. Family b.19.1.0: automated matches [227246] (1 protein)
   not a true family

6. Protein automated matches [227017] (57 species)
   not a true protein

7. Species Influenza a virus (a/harbour seal/germany/1/2014(h10n7)) [TaxId:1572188] [391916] (10 PDB entries)

8. Domain d6txoc_: 6txo C: [392182]
   Other proteins in same PDB: d6txob_, d6txod_, d6txof_
   automated match to d3ztna_
   complexed with ca, edo, gal, nag, sia; mutant

Details for d6txoc_

PDB Entry: 6txo, 2.4 Å

PDB Description: crystal structure of the haemagglutinin mutant (gln226leu, del228) from an h10n7 seal influenza virus isolated in germany in complex with avian receptor analogue 3'-sln

PDB Compounds: (C:) Hemagglutinin

SCOPe Domain Sequences for d6txoc_:

Sequence, based on SEQRES records:

>d6txoc_ b.19.1.0 (C:) automated matches {Influenza a virus (a/harbour seal/germany/1/2014(h10n7)) [TaxId: 1572188]}
dkiclghhavangtivktltneqeevtnatetvestslnrlcmkgrnhkdlgnchpigml
igtpacdlhltgtwdtlierknaiaycypgatvneealrqkimesggiskintgftygss
insagttkacmrnggnsfyaelkwlvsknkgqnfpqttntyrnadtaehlimwgihhpss
tqekndlygtqslsisvgsstyknnfvpvvgarpqvnglsridfhwtlvqpgdkitfshn
ggliapsrvskligrglgiqseapidnsceskcfwrggsintrlpfqnlsprtvgqcpky
vnkkslmlatgmrnvpe

Sequence, based on observed residues (ATOM records):

>d6txoc_ b.19.1.0 (C:) automated matches {Influenza a virus (a/harbour seal/germany/1/2014(h10n7)) [TaxId: 1572188]}
dkiclghhavangtivktltneqeevtnatetvestslnrlcmkgrnhkdlgnchpigml
igtpacdlhltgtwdtlierknaiaycypgatvneealrqkimesggiskintgftygss
insagttkacmrnggnsfyaelkwlvsknkgqnfpqttntyrnadtaehlimwgihhpss
tqekndlygtqslsisvgsstyknnfvpvvlsridfhwtlvqpgdkitfshnggliapsr
vskligrglgiqseapidnsceskcfwrggsintrlpfqnlsprtvgqcpkyvnkkslml
atgmrnvpe

Timeline for d6txoc_:

• d6txoc_ is new in SCOPe 2.07-stable
  
• d6txoc_ appears in the current release, SCOPe 2.08