SCOPe 2.08: Domain d6kyjg1: 6kyj G:13-150

Lineage for d6kyjg1 (6kyj G:13-150)

1. Root: SCOPe 2.08

2. Class d: Alpha and beta proteins (a+b) [53931] (396 folds)

3. Fold d.58: Ferredoxin-like [54861] (62 superfamilies)
   alpha+beta sandwich with antiparallel beta-sheet; (beta-alpha-beta)x2

4. Superfamily d.58.9: RuBisCO, large subunit, small (N-terminal) domain [54966] (2 families)
   C-terminal domain is beta/alpha barrel

5. Family d.58.9.1: Ribulose 1,5-bisphosphate carboxylase-oxygenase [54967] (1 protein)

6. Protein Ribulose 1,5-bisphosphate carboxylase-oxygenase [54968] (13 species)

7. Species Rice (Oryza sativa) [TaxId:4530] [117976] (5 PDB entries)
   Uniprot P12089

8. Domain d6kyjg1: 6kyj G:13-150 [390733]
   Other proteins in same PDB: d6kyja2, d6kyjc2, d6kyje2, d6kyjg2, d6kyjs_, d6kyju_, d6kyjw_, d6kyjy_
   automated match to d1wdde2
   complexed with gol, so4

Details for d6kyjg1

PDB Entry: 6kyj, 1.7 Å

PDB Description: hybrid-rubisco (rice rbcl and sorghum rbcs) in complex with sulfate ions

PDB Compounds: (G:) ribulose bisphosphate carboxylase large chain

SCOPe Domain Sequences for d6kyjg1:

Sequence, based on SEQRES records:

>d6kyjg1 d.58.9.1 (G:13-150) Ribulose 1,5-bisphosphate carboxylase-oxygenase {Rice (Oryza sativa) [TaxId: 4530]}
fkagvkdykltyytpeyetkdtdilaafrvtpqpgvppeeagaavaaesstgtwttvwtd
gltsldrykgrcyhiepvvgednqyiayvaypldlfeegsvtnmftsivgnvfgfkalra
lrledlripptysktfqg

Sequence, based on observed residues (ATOM records):

>d6kyjg1 d.58.9.1 (G:13-150) Ribulose 1,5-bisphosphate carboxylase-oxygenase {Rice (Oryza sativa) [TaxId: 4530]}
fkagvltyytpeyetkdtdilaafrvtpqpgvppeeagaavaaesstgtwttvwtdglts
ldrykgrcyhiepvvgednqyiayvaypldlfeegsvtnmftsivgnvfgfkalralrle
dlripptysktfqg

Timeline for d6kyjg1:

• d6kyjg1 first appeared in SCOPe 2.07