Lineage for d7jota_ (7jot A:)

  1. Root: SCOPe 2.08
  2. 2739516Class b: All beta proteins [48724] (180 folds)
  3. 2821496Fold b.121: Nucleoplasmin-like/VP (viral coat and capsid proteins) [88632] (7 superfamilies)
    sandwich; 8 strands in 2 sheets; jelly-roll; some members can have additional 1-2 strands
    characteristic interaction between the domains of this fold allows the formation of five-fold and pseudo six-fold assemblies
  4. 2823004Superfamily b.121.5: ssDNA viruses [88645] (4 families) (S)
  5. 2823027Family b.121.5.2: Parvoviridae-like VP [88646] (3 proteins)
    automatically mapped to Pfam PF00740
  6. 2823053Protein automated matches [190920] (12 species)
    not a true protein
  7. 2823154Species Adeno-associated virus - 7 [TaxId:202812] [390290] (1 PDB entry)
  8. 2823155Domain d7jota_: 7jot A: [390291]
    automated match to d3oaha_

Details for d7jota_

PDB Entry: 7jot (more details), 2.7 Å

PDB Description: adeno-associated virus strain aav7 capsid icosahedral structure
PDB Compounds: (A:) capsid protein

SCOPe Domain Sequences for d7jota_:

Sequence; same for both SEQRES and ATOM records: (download)

>d7jota_ b.121.5.2 (A:) automated matches {Adeno-associated virus - 7 [TaxId: 202812]}
dgvgnasgnwhcdstwlgdrvittstrtwalptynnhlykqissetagstndntyfgyst
pwgyfdfnrfhchfsprdwqrlinnnwgfrpkklrfklfniqvkevttndgvttiannlt
stiqvfsdseyqlpyvlgsahqgclppfpadvfmipqygyltlnngsqsvgrssfycley
fpsqmlrtgnnfefsysfedvpfhssyahsqsldrlmnplidqylyylartqsnpggtag
nrelqfyqggpstmaeqaknwlpgpcfrqqrvsktldqnnnsnfawtgatkyhlngrnsl
vnpgvamathkddedrffpssgvlifgktgatnkttlenvlmtneeeirptnpvateeyg
ivssnlqaantaaqtqvvnnqgalpgmvwqnrdvylqgpiwakiphtdgnfhpsplmggf
glkhpppqilikntpvpanppevftpakfasfitqystgqvsveiewelqkenskrwnpe
iqytsnfekqtgvdfavdsqgvyseprpigtryltrnl

SCOPe Domain Coordinates for d7jota_:

Click to download the PDB-style file with coordinates for d7jota_.
(The format of our PDB-style files is described here.)

Timeline for d7jota_: