Class c: Alpha and beta proteins (a/b) [51349] (148 folds) |
Fold c.1: TIM beta/alpha-barrel [51350] (34 superfamilies) contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678 the first seven superfamilies have similar phosphate-binding sites |
Superfamily c.1.8: (Trans)glycosidases [51445] (15 families) |
Family c.1.8.7: NagZ-like [51553] (4 proteins) Pfam PF00933; Glycosyl hydrolase family 3 domain Some members have reversed beta strand compared to other members of fold |
Protein automated matches [191056] (3 species) not a true protein |
Species Hordeum vulgare [TaxId:112509] [270740] (32 PDB entries) |
Domain d6jgoa1: 6jgo A:1-388 [390151] Other proteins in same PDB: d6jgoa2 automated match to d1x38a1 complexed with 1pe, act, gol, nag, so4; mutant |
PDB Entry: 6jgo (more details), 1.95 Å
SCOPe Domain Sequences for d6jgoa1:
Sequence; same for both SEQRES and ATOM records: (download)
>d6jgoa1 c.1.8.7 (A:1-388) automated matches {Hordeum vulgare [TaxId: 112509]} dyvlykdatkpvedrvadllgrmtlaekigqmtqierlvatpdvlrdnfigsllsgggsv prkgatakewqdmvdgfqkacmstrlgipmiygidavhgqnnvygatifphnvglgatrd pylvkrigeatalevratgiqyafapciavcrdprwgrcyesysedrrivqsmtelipgl qgdvpkdftsgmpfvagknkvaacakhfvgdggtvdginenntiinreglmnihmpaykn amdkgvstvmisysswngvkmhanqdlvtgylkdtlkfkgfvisdwegidrittpagsdy sysvkasilagldmimvpnkyqqfisiltghvnggvipmsriddavtrilrvkftmglfe npyadpamaeqlgkqehrdlareaarks
Timeline for d6jgoa1: