Lineage for d6jgoa1 (6jgo A:1-388)

  1. Root: SCOPe 2.08
  2. 2826024Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2826025Fold c.1: TIM beta/alpha-barrel [51350] (34 superfamilies)
    contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
    the first seven superfamilies have similar phosphate-binding sites
  4. 2829818Superfamily c.1.8: (Trans)glycosidases [51445] (15 families) (S)
  5. 2832028Family c.1.8.7: NagZ-like [51553] (4 proteins)
    Pfam PF00933; Glycosyl hydrolase family 3 domain
    Some members have reversed beta strand compared to other members of fold
  6. 2832066Protein automated matches [191056] (3 species)
    not a true protein
  7. 2832067Species Hordeum vulgare [TaxId:112509] [270740] (32 PDB entries)
  8. 2832086Domain d6jgoa1: 6jgo A:1-388 [390151]
    Other proteins in same PDB: d6jgoa2
    automated match to d1x38a1
    complexed with 1pe, act, gol, nag, so4; mutant

Details for d6jgoa1

PDB Entry: 6jgo (more details), 1.95 Å

PDB Description: crystal structure of barley exohydrolasei w434h mutant in complex with 4i,4iii,4v-s-trithiocellohexaose
PDB Compounds: (A:) beta-d-glucan glucohydrolase isoenzyme exo1

SCOPe Domain Sequences for d6jgoa1:

Sequence; same for both SEQRES and ATOM records: (download)

>d6jgoa1 c.1.8.7 (A:1-388) automated matches {Hordeum vulgare [TaxId: 112509]}
dyvlykdatkpvedrvadllgrmtlaekigqmtqierlvatpdvlrdnfigsllsgggsv
prkgatakewqdmvdgfqkacmstrlgipmiygidavhgqnnvygatifphnvglgatrd
pylvkrigeatalevratgiqyafapciavcrdprwgrcyesysedrrivqsmtelipgl
qgdvpkdftsgmpfvagknkvaacakhfvgdggtvdginenntiinreglmnihmpaykn
amdkgvstvmisysswngvkmhanqdlvtgylkdtlkfkgfvisdwegidrittpagsdy
sysvkasilagldmimvpnkyqqfisiltghvnggvipmsriddavtrilrvkftmglfe
npyadpamaeqlgkqehrdlareaarks

SCOPe Domain Coordinates for d6jgoa1:

Click to download the PDB-style file with coordinates for d6jgoa1.
(The format of our PDB-style files is described here.)

Timeline for d6jgoa1:

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Domains from same chain:
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d6jgoa2